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scnpilot_p_inoc_scaffold_16_curated_472

Organism: scnpilot_dereplicated_Magnetospirillum_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 493775..494344

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase sigma factor n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F123_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 74.1
  • Coverage: 185.0
  • Bit_score: 270
  • Evalue 9.60e-70
Putative RNA polymerase sigma factor {ECO:0000313|EMBL:CDK97986.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.1
  • Coverage: 185.0
  • Bit_score: 270
  • Evalue 1.30e-69
rpoQ; RNA polymerase sigma Q factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 53.1
  • Coverage: 175.0
  • Bit_score: 171
  • Evalue 2.50e-40

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Taxonomy

Magnetospirillum gryphiswaldense → Magnetospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 570
ATGATCAACGACCGCGCCAAGCATCTGGAAGACAGCGCCCGCTGGGGAGCATGGATGCAGGCCGCCCAGGATGGCGACCAAGTGGCCTATGGCCGTTTGCTGGCCGAGGTGGCCCCGGTGGCGCGACGCATGGCGGCGCGACAGTTGGCGGCGTCCGGCGTGGCCGAGGACATGGAAGACGTGGTCCAGGAAATCCTGCTGACCCTGCACGGGGCGCGTCATACCTATGATCCCGCTCGCCCCTTCCTGCCGTGGTTCGCCGCTATCGTTGACCACCGGGTCAAGGATGGACTGCGTTCGCGTCGCCGCCATCAGGGCCGCGAGACGGATATTGACGCGGTGCCTGAAACTTTTCTGAGCCAGGCGGCGAATACGTCTGCGACCGACCGCATGGATTTGGGCAAGGCGGTGGCCAAGCTGCCGGCCGGACAGCGGCAGGCGGTGGAGATGCTGAAGATCAAGGAAATGTCCCTGGCCGAAGCCTCGGCCGCGTCGGGACAAAGCGTGCCGGCGTTGAAGGTGGCCATGCATCGGGCACTGAAGACGCTGAAAGGAATGTTGGGCCCATGA
PROTEIN sequence
Length: 190
MINDRAKHLEDSARWGAWMQAAQDGDQVAYGRLLAEVAPVARRMAARQLAASGVAEDMEDVVQEILLTLHGARHTYDPARPFLPWFAAIVDHRVKDGLRSRRRHQGRETDIDAVPETFLSQAANTSATDRMDLGKAVAKLPAGQRQAVEMLKIKEMSLAEASAASGQSVPALKVAMHRALKTLKGMLGP*