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scnpilot_p_inoc_scaffold_303_curated_30

Organism: scnpilot_dereplicated_Magnetospirillum_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 28428..28874

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.4
  • Coverage: 147.0
  • Bit_score: 286
  • Evalue 2.40e-74
ribonuclease HI; K03469 ribonuclease HI [EC:3.1.26.4] similarity KEGG
DB: KEGG
  • Identity: 81.3
  • Coverage: 139.0
  • Bit_score: 253
  • Evalue 3.00e-65
Ribonuclease HI, degrades RNA of DNA-RNA hybrids n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F3R8_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 88.4
  • Coverage: 147.0
  • Bit_score: 286
  • Evalue 1.70e-74

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Taxonomy

Magnetospirillum gryphiswaldense → Magnetospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 447
ATGAGCGACGCCGTCGAGATTTTCACCGACGGGGCGTGCTCCGGCAATCCCGGCCCCGGCGGCTGGGGGGCGATCTTGCGCTATAAGGGCGTGGAAAAGGAATTGTGCGGCGGCGAGCTCGACACCACCAACAACCGCATGGAAATGATGGCCGCCATCGTCGCGCTGGAAACCCTGACCCGGCCCTGCGCCATCACCCTTTACACCGACAGCCAGTACGTCATGAAGGGCATGACCGAATGGCTGCGCGGCTGGAAGGCCCGGGGCTGGAAGACCGCCGACAGGAAGCCGGTGAAGAACGACGACCTGTGGAAACGTCTGGACGAAGCCTGCGCCCGGCATAAAATCACTTGGCAATGGGTCAAGGGCCATGCCGGCCACGCGGAAAACGAACGCGCCGACCAGTTGGCCCGCGACGGCATCAAGCTGGTGCTGGGCGAAAGCTGA
PROTEIN sequence
Length: 149
MSDAVEIFTDGACSGNPGPGGWGAILRYKGVEKELCGGELDTTNNRMEMMAAIVALETLTRPCAITLYTDSQYVMKGMTEWLRGWKARGWKTADRKPVKNDDLWKRLDEACARHKITWQWVKGHAGHAENERADQLARDGIKLVLGES*