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scnpilot_p_inoc_scaffold_303_curated_36

Organism: scnpilot_dereplicated_Magnetospirillum_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(31870..32382)

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.1
  • Coverage: 170.0
  • Bit_score: 300
  • Evalue 1.10e-78
N-formylmethionyl-tRNA deformylase; K01462 peptide deformylase [EC:3.5.1.88] similarity KEGG
DB: KEGG
  • Identity: 76.9
  • Coverage: 169.0
  • Bit_score: 271
  • Evalue 2.10e-70
Peptide deformylase (PDF) (Polypeptide deformylase) n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F6H8_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 87.1
  • Coverage: 170.0
  • Bit_score: 300
  • Evalue 7.80e-79

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Taxonomy

Magnetospirillum gryphiswaldense → Magnetospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 513
ATGGCCGTGATGCCCATCCTGACCGCCCCCGACCCGCGCCTGAAGCAAAAGGCCAAGCCTGTTGCCCAGGTGGACGATGCTGTGCGGGCGCTGATGGACGACATGCTGGAAACCATGTACGCCGCCCCCGGGATCGGTCTGGCGGCGCCGCAGGTGGCGGTGGGGCAACGGGTGATCGTCGCCGATATCGGCCGGTCCGAGGAAGATCGCCAGCCGGTGCGCATGGCCAACCCGGAAATCGTCTGGGTGTCCGACGACGACAACACCTATGAAGAAGGCTGTCTGTCGGTGCCGGAACATTACGCTTCGGTGGTGCGGCCCCGCGCCGTGCGGGTGCGCTATCTGGACGAAGCCGGCACGCAAAAGGAAATCGACGCCGACGGCCTGTTGGCCACTGTGCTGCAGCACGAAATCGACCATCTGGACGGGGTGCTGTTCATCGACCATCTGTCGTCCTTGAAGCGCAACATGATTTTGCGCAAGCTGCTGAAGTCCAAGAAAGAAGCCGGCTGA
PROTEIN sequence
Length: 171
MAVMPILTAPDPRLKQKAKPVAQVDDAVRALMDDMLETMYAAPGIGLAAPQVAVGQRVIVADIGRSEEDRQPVRMANPEIVWVSDDDNTYEEGCLSVPEHYASVVRPRAVRVRYLDEAGTQKEIDADGLLATVLQHEIDHLDGVLFIDHLSSLKRNMILRKLLKSKKEAG*