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scnpilot_p_inoc_scaffold_19_curated_254

Organism: scnpilot_dereplicated_Magnetospirillum_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(268876..269727)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase specialized sigma subunit n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2Z404_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 70.4
  • Coverage: 274.0
  • Bit_score: 378
  • Evalue 4.90e-102
DNA-directed RNA polymerase specialized sigma subunit sigma24-like protein {ECO:0000313|EMBL:KIM00689.1}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.5
  • Coverage: 277.0
  • Bit_score: 379
  • Evalue 3.10e-102
DNA-directed RNA polymerase specialized sigma subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 70.1
  • Coverage: 274.0
  • Bit_score: 373
  • Evalue 8.40e-101

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Taxonomy

Magnetospirillum magnetotacticum → Magnetospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 852
ATGACCACGGCTGATCCCCGTCTTGCCCCGTTCCTGGACCAGCGGCCGCGTTTGCGGCTGCTGGCTTACCGGTTGCTGGGCAGCATCAGCGACGCCGACGACGTGATCCAGGACGCCTGGCTGAAATGGTGCGTCCTCGATGACGGAATCGTGCGTGATCCGGCGGCGTTCCTGACCACCCAGGTGACCCGTCTGTCCATCGACCGCCTGCGCAAGCTGAAGCGCCAGCGCGAACTGGGGCGCCAATGGCTTCCCGAGCCGTGGTTCGACACGGTGGCAGAGGACGAGGCGGACCTGTCCACCGGGCTGTTGCTGCTGTTGGAACGGCTTGGCGCGGAACAGCGCGCCGTCTATGTGCTGCGCGAGGCCATGGACCTGGATTTCGCCGAGATCGCCGCCATCTTGGACAAGAGCGTCGCCACCTGCCGCCAGATCATGAGCCGGGCGCGGGCCGCGCTGAAGGGCCAGCCGCGTTTCGCCTGGGACGCGGCGCAGACCGCGACCCTGGTGCAGCGTTTCGCTAGCGCCTGCGAACAACGCGATTATGCCGCTTTGGTGGACTTGCTGGGTGACGAATGCCGTCTGGTCAGCTTTGCCGGCGCCAAGGGCAAGGCGGCGCTGAACCCCATTCGTGGCCCCGACAAGATCAGCCGTTTCCTGCTGGGGGTGCGGCGCAAGTTCCTGGCCGCCGACTTCCACTTGCGTCCGGTGGTGGTCAACGGTCTGCCGGCCCTGGTGGGCGCCGATGGGGACGGAGCCCGCTGGGTCCTGAGTTTCGGCTGTCGGGATGGAAAAATCTTCGGGGTCTACCTGATGGCAGACCCCGACAAAGTCGTTCACGCCCCGTCTTGA
PROTEIN sequence
Length: 284
MTTADPRLAPFLDQRPRLRLLAYRLLGSISDADDVIQDAWLKWCVLDDGIVRDPAAFLTTQVTRLSIDRLRKLKRQRELGRQWLPEPWFDTVAEDEADLSTGLLLLLERLGAEQRAVYVLREAMDLDFAEIAAILDKSVATCRQIMSRARAALKGQPRFAWDAAQTATLVQRFASACEQRDYAALVDLLGDECRLVSFAGAKGKAALNPIRGPDKISRFLLGVRRKFLAADFHLRPVVVNGLPALVGADGDGARWVLSFGCRDGKIFGVYLMADPDKVVHAPS*