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scnpilot_p_inoc_scaffold_132_curated_74

Organism: scnpilot_dereplicated_Magnetospirillum_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(73373..73909)

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.3
  • Coverage: 176.0
  • Bit_score: 252
  • Evalue 6.10e-64
2',5' RNA ligase n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4TU26_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 69.3
  • Coverage: 176.0
  • Bit_score: 252
  • Evalue 4.30e-64
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 51.4
  • Coverage: 177.0
  • Bit_score: 170
  • Evalue 4.00e-40

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Taxonomy

Magnetospirillum gryphiswaldense → Magnetospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 537
ATGATCCGCCTGTTCGTCGGCCTGGCCCTGCCCGCCGAACTGGCGGCGCGGCTGGAATCCCTGGGCGGCGGTGTTCCCGGCGCCCGCTGGGTGGCGGGACGCAACCTGCATCTGACCCTGCGTTTCGCCGGCGAGGTGGACGAAGACGTGGCCGAGGACCTGCACCATCGATTGGGCGGCCTGCGGGCGCCGGTTTTCGACATCCGGCTGCGCGGTTTCGGCACTTTCGGCGGCCGCAAGCCCAGGGCGCTGTGGGTCGGCGCCGAGCCGAACCCGGCGCTGGACGCCCTGCAAAGCCGCATCGAGCGGCTGGCGCAGGCCGCCGGCCTGGAGCCCGAGACGCGTAATTTCACCCCGCACGTCACCCTGGCCTGGCTGAAGGATGCCCCCGCCGACCGCATCGCCGCCTTCATGCGCCACCATTCGCCCTTTGCCGCCAGCTTCACCGTGGATCACGTCTGCCTGTACCAGTCGCACCTGCATGCCCAAGGGGCGGAATATCAGGTCCTGGCCGAATATGCGCTGGATTCAAAATAA
PROTEIN sequence
Length: 179
MIRLFVGLALPAELAARLESLGGGVPGARWVAGRNLHLTLRFAGEVDEDVAEDLHHRLGGLRAPVFDIRLRGFGTFGGRKPRALWVGAEPNPALDALQSRIERLAQAAGLEPETRNFTPHVTLAWLKDAPADRIAAFMRHHSPFAASFTVDHVCLYQSHLHAQGAEYQVLAEYALDSK*