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scnpilot_p_inoc_scaffold_132_curated_126

Organism: scnpilot_dereplicated_Magnetospirillum_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(125197..125934)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.2
  • Coverage: 245.0
  • Bit_score: 405
  • Evalue 5.90e-110
pseudouridylate synthase; K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] similarity KEGG
DB: KEGG
  • Identity: 70.2
  • Coverage: 245.0
  • Bit_score: 351
  • Evalue 1.70e-94
tRNA pseudouridine synthase A n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U350_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 79.2
  • Coverage: 245.0
  • Bit_score: 405
  • Evalue 4.20e-110

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Taxonomy

Magnetospirillum gryphiswaldense → Magnetospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 738
ATGCCGCGTTTCAAGCTGCTGGTGGAATATCACGGCACGCCCTATGTGGGCTGGCAACGCCAGGACAACGGCCCATCCGTCCAAGGTGAACTGGAAAAGGCCATCTTCAAGCTGTCCGGCGAGGAAGTGACGGTGACCGCCGCCGGCCGCACCGATGCCGGCGTCCACGCCACCGGACAGGTGGCGCATTTCGACCTGGCCAAGGATTTCACCGCCGACCGGGTGCAGGGCGGCCTGAACTTCCACTTAAAGCCCCATCCCATCGCCATCCGCGCCGCCGAACAGGTGGGTGACGATTTCCATGCGCGCTTTTCGGCCCAGGGCCGGTCTTATCTGTACCGTATCGTCAATCGGCGGGCGCCGCTCGCCATTGACGCCGACCGCGCCTGGTGGGTGGCGGTGAAACTGGATGCGGCAGCCATGCACCAGGCCGCGCAACTGCTGTTGGGCCGCCACGACTTCACCAGCTTCCGCGCCGCCGCCTGTCAGGCGCAAAGCCCCGACAAATCCTTGGACGTGCTGGACGTGACCCAGGTTGACGAGGAAATCCGCATCGTCGCCAAGGCCCGATCCTTCCTGCACCACCAAGTGCGCAACATGGTGGGCACGCTGAAACTGGTGGGCGAGGGCAAATGGACGCCTGAGCGGGTCAGACAGGCGCTGGAGGCCCGCGACCGATCGGCGGCCGGCCCCACCGCGCCGCCCGAGGGTCTGTACTTTACCGGGGTGAAGTATTAG
PROTEIN sequence
Length: 246
MPRFKLLVEYHGTPYVGWQRQDNGPSVQGELEKAIFKLSGEEVTVTAAGRTDAGVHATGQVAHFDLAKDFTADRVQGGLNFHLKPHPIAIRAAEQVGDDFHARFSAQGRSYLYRIVNRRAPLAIDADRAWWVAVKLDAAAMHQAAQLLLGRHDFTSFRAAACQAQSPDKSLDVLDVTQVDEEIRIVAKARSFLHHQVRNMVGTLKLVGEGKWTPERVRQALEARDRSAAGPTAPPEGLYFTGVKY*