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scnpilot_p_inoc_scaffold_2080_curated

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2080_curated_1
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(214..945)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E3D0_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ50651.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2080_curated_2
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(971..2479)
DNA (1509bp) protein (503aa)
ADP-ribose pyrophosphatase (EC:3.6.1.13)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A2V5_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ50644.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
scnpilot_p_inoc_scaffold_2080_curated_3
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2538..2972)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AMH0_9MICO
ATPase AAA {ECO:0000313|EMBL:EXJ50643.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
ATPase; K07478 putative ATPase
scnpilot_p_inoc_scaffold_2080_curated_4
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3811..4113
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A3T7_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD83386.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
dioxygenase
scnpilot_p_inoc_scaffold_2080_curated_5
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4230..5684
DNA (1455bp) protein (485aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E3C6_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC08676.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2080_curated_6
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5778..6335
DNA (558bp) protein (186aa)
SAM-dependent methyltransferase n=2 Tax=Microbacterium RepID=H8E3C5_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ50641.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
SAM-dependent methyltransferase
scnpilot_p_inoc_scaffold_2080_curated_7
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6314..8590)
DNA (2277bp) protein (759aa)
relA; guanosine polyphosphate pyrophosphohydrolase/synthetase; K00951 GTP pyrophosphokinase [EC:2.7.6.5]
RelA/SpoT family protein n=2 Tax=Microbacterium RepID=H8E3C4_9MICO
(P)ppGpp synthetase {ECO:0000313|EMBL:EXJ50640.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
scnpilot_p_inoc_scaffold_2080_curated_8
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8650..9639)
DNA (990bp) protein (330aa)
Protein-export membrane protein SecF n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AMG4_9MICO
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
preprotein translocase subunit SecF; K03074 preprotein translocase subunit SecF
scnpilot_p_inoc_scaffold_2080_curated_9
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9639..11378)
DNA (1740bp) protein (580aa)
Protein translocase subunit SecD n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E3C2_9MICO
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
preprotein translocase subunit SecD; K03072 preprotein translocase subunit SecD
scnpilot_p_inoc_scaffold_2080_curated_10
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11414..11851)
DNA (438bp) protein (146aa)
YajC family protein n=2 Tax=Microbacterium RepID=H8E3C1_9MICO
YajC family protein {ECO:0000313|EMBL:EIC08671.1}; Flags: Precursor;; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
preprotein translocase subunit YajC; K03210 preprotein translocase subunit YajC
scnpilot_p_inoc_scaffold_2080_curated_11
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11917..12948)
DNA (1032bp) protein (344aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
ruvB; holliday junction resolvasome, helicase subunit; K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12]
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E3C0_9MICO
scnpilot_p_inoc_scaffold_2080_curated_12
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12941..13564)
DNA (624bp) protein (208aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
holliday junction resolvasome, DNA-binding subunit; K03550 holliday junction DNA helicase RuvA [EC:3.6.4.12]
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A2U7_9MICO
scnpilot_p_inoc_scaffold_2080_curated_13
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13629..14186)
DNA (558bp) protein (186aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
holliday junction resolvasome, endonuclease subunit; K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4]
Crossover junction endodeoxyribonuclease RuvC n=2 Tax=Microbacterium RepID=H8E3B8_9MICO
scnpilot_p_inoc_scaffold_2080_curated_14
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14355..15113)
DNA (759bp) protein (253aa)
Probable transcriptional regulatory protein OR221_1347 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E3B7_9MICO
Probable transcriptional regulatory protein AS96_13725 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2080_curated_15
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15148..15681)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A9W5_9MICO
Pyridoxamine 5-phosphate oxidase {ECO:0000313|EMBL:EXJ50632.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2080_curated_16
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15728..16135)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E3B5_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ50649.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
scnpilot_p_inoc_scaffold_2080_curated_17
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16574..17176)
DNA (603bp) protein (201aa)
Pyridoxal 5'-phosphate synthase subunit PdxT {ECO:0000256|HAMAP-Rule:MF_01615}; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01615};; Pdx2 {ECO:0000256|HAMAP-Rule:MF_01615}; Pyridoxal 5'-phosphate synthase glutaminase subunit {ECO:0000256|HAMAP-Rule:MF_01615}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
glutamine amidotransferase; K08681 glutamine amidotransferase [EC:2.6.-.-]
Glutamine amidotransferase subunit PdxT n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A2U3_9MICO
scnpilot_p_inoc_scaffold_2080_curated_18
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17170..17370)
DNA (201bp) protein (67aa)
Pyridoxal 5'-phosphate synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824}; Short=PLP synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824};; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01824};; Pdx1 {ECO:0000256|HAMAP-Rule:MF_01824}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
pyridoxine biosynthesis protein; K06215 pyridoxine biosynthesis protein [EC:4.-.-.-]
Pyridoxal biosynthesis lyase PdxS n=2 Tax=Microbacterium RepID=H8E3B3_9MICO
Displaying 18 items

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