ggKbase home page

scnpilot_p_inoc_scaffold_2091_curated_7

Organism: scnpilot_dereplicated_Microbacterium_7

near complete RP 45 / 55 MC: 4 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(5889..7751)

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent RNA helicase DeaD {ECO:0000256|HAMAP-Rule:MF_00964}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00964};; Cold-shock DEAD box protein A {ECO:0000256|HAMAP-Rule:MF_00964}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.4
  • Coverage: 625.0
  • Bit_score: 1192
  • Evalue 0.0
deaD; superfamily II DNA and RNA helicase; K05592 ATP-dependent RNA helicase DeaD [EC:3.6.4.13] similarity KEGG
DB: KEGG
  • Identity: 80.1
  • Coverage: 582.0
  • Bit_score: 884
  • Evalue 1.40e-254
ATP-dependent RNA helicase DeaD n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E6Z9_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 98.4
  • Coverage: 625.0
  • Bit_score: 1192
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium laevaniformans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1863
GTGACGGCGTCGGGCGGCTACCGTGGGTCTATGGCCTCTGACAGCTTGACCGATCCCCTCGAGGCCGCGCCCGCGCCCGACACCCAGACCGACGCCGAATCCTCGGCATCCGCCCCGGCATCCGCCGCGCCGTCGACCCCCGGCTTCGCCGATCTCGGCCTCGACGCCGCGGTCCTCAAAGCGCTGAAGGACGTGGGCTACGAGACGCCGTCGGCGATCCAGGCCGCGACGATCCCGCCGCTGCTGGCCGGTCGCGACGTGCTCGGCACCGCGCAGACGGGAACGGGCAAGACCGCGGCGTTCGCGCTGCCGATCCTGTCGCAGCTGGACCTCTCGCAGAAGACGCCGCAGGCGCTCGTGCTCGCGCCGACGCGCGAGCTCGCGCTGCAGGTGTGCGAGGCGTTCGAGTCCTACGCGGGACATCTGCGCGGCGTGCACGTGCTGCCCGTCTACGGCGGCCAGGGCTACGGGCAGCAGCTGTCGGCGCTTCGCCGTGGTGTGCACATCGTCGTCGGCACGCCCGGTCGCATCATGGACCACCTCGACAAGGGCACGCTCGACCTCTCCGAGCTGCGCTTCCTCGTGCTCGACGAGGCCGATGAGATGCTCAAGATGGGCTTCGCCGAAGACGTCGAGACGATCCTCGCCGACACCCCCGCCGGCAAGCAGGTCGCGCTCTTCTCCGCGACCATGCCCGCCCAGATCCGCCGCCTCGCGGGCACGTATCTGAAGGATGCCGAGGAGATCAACGTCAAGGCGAAGACCTCGACGGCGACCAACATCACGCAGCGCTACCTGATCGTGTCGTACCCGCAGAAGGTCGATGCACTCACCCGCATCCTCGAAGTCGAGAACTTCGAGGGCATGATCGTGTTCACGCGCACCAAGAACGAGACCGAGACCCTCGCCGAGAAGCTGCGCGCCCGCGGCTATGCGGCGGCCGCCATCAACGGCGACGTCGCGCAGGTGCAGCGCGAACGCACCGTCAACCAGCTCAAGGACGGCAAGCTCGACATCCTCGTCGCCACCGACGTCGCCGCGCGCGGGCTCGACGTCGAGCGCATCAGCCACGTCGTCAACTTCGACCTGCCGATCGACACCGAGTCGTACGTCCACCGCATCGGCCGCACGGGTCGCGCCGGGCGGTCGGGCGACGCGATCAGCTTCGTCACCCCGCGTGAGCGGCGCATGCTCGCTTCGATCGAGAAGGCGACGCGCCAGCCGCTCACCGAGATGTCCCTGCCGACCGCCGAAGACGTCAACGCGACGCGCCTCACCCGCTTCGACGACGCGATCACGGCGGCGCTCGCCGAGACCGAGCGCATCGACCGCTTTCGCGACATCATCAACCACTACGTCACCCACCACGACGTGCCCGAGGCGGATGTCGCCGCGGCGCTCGCCGTCGTCGCGCAGGGGGAGACCCCGCTGCTGCTCGACGAGGACCAGCCCGCGCCGGCGCGGCGTGAACGGTTCGACCGTGACGATCGCGGACGCGACCGCAGCGACCGCGACCGCGACGACCGGCCCCGCCGCGACGATCGCCGTCGCTCGGGAGGCCCGACCGCGACCTACCGCATCGAGGTCGGTCGTCGGCACAAGGTCGAGCCGCGTCAGATCGTGGGAGCACTCGCCAATGAAGGCGGTCTTCGCCGCGAGGACTTCGGCGCGATCCAGATCCGTCCCGACTTCTCGCTGGTCGAACTGCCCGCCGACCTTCCCCGCGAGACGCTCCAGCGGCTGGAGGGCACCCGCATCAGCGGTCGCCTGATCGAGATCAAGCCCGACCGCTTCCAGCGCTCCGCCAAGCGTCCGGACCGCGACCGTGACGACCGCGGCGATCGGCGCCCGCGCCGCGACTGA
PROTEIN sequence
Length: 621
VTASGGYRGSMASDSLTDPLEAAPAPDTQTDAESSASAPASAAPSTPGFADLGLDAAVLKALKDVGYETPSAIQAATIPPLLAGRDVLGTAQTGTGKTAAFALPILSQLDLSQKTPQALVLAPTRELALQVCEAFESYAGHLRGVHVLPVYGGQGYGQQLSALRRGVHIVVGTPGRIMDHLDKGTLDLSELRFLVLDEADEMLKMGFAEDVETILADTPAGKQVALFSATMPAQIRRLAGTYLKDAEEINVKAKTSTATNITQRYLIVSYPQKVDALTRILEVENFEGMIVFTRTKNETETLAEKLRARGYAAAAINGDVAQVQRERTVNQLKDGKLDILVATDVAARGLDVERISHVVNFDLPIDTESYVHRIGRTGRAGRSGDAISFVTPRERRMLASIEKATRQPLTEMSLPTAEDVNATRLTRFDDAITAALAETERIDRFRDIINHYVTHHDVPEADVAAALAVVAQGETPLLLDEDQPAPARRERFDRDDRGRDRSDRDRDDRPRRDDRRRSGGPTATYRIEVGRRHKVEPRQIVGALANEGGLRREDFGAIQIRPDFSLVELPADLPRETLQRLEGTRISGRLIEIKPDRFQRSAKRPDRDRDDRGDRRPRRD*