ggKbase home page

scnpilot_p_inoc_scaffold_1117_curated_5

Organism: scnpilot_dereplicated_Microbacterium_7

near complete RP 45 / 55 MC: 4 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 3587..4450

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.3
  • Coverage: 287.0
  • Bit_score: 569
  • Evalue 2.80e-159
dapF; diaminopimelate epimerase; K01778 diaminopimelate epimerase [EC:5.1.1.7] similarity KEGG
DB: KEGG
  • Identity: 74.4
  • Coverage: 285.0
  • Bit_score: 414
  • Evalue 3.30e-113
Diaminopimelate epimerase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AXU8_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 99.3
  • Coverage: 287.0
  • Bit_score: 569
  • Evalue 2.00e-159

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium sp. oral taxon 186 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 864
GTGGCAGAGCCGATCGCATTCACCAAGGGACACGGCACGGGCAACGACTTCGTGATCGTCCCGGATGACGAGGGCGTCCTCGACCTCTCGGACTCTCAGGTCGCCGCGCTCTGCGACCGCCGTTTCGGCATCGGCGGCGACGGCATCCTGCGCGTCGTCCGCAGCGCCCGCATACGCGAGGGCGAAGCGACGGCGGATGCCGAGTGGTTCATGGACTACCGCAACGCCGACGGGTCGGCCGCCGAGATGTGCGGCAACGGCACGCGTGTCTTCGCGAAGTACCTCGTCGACACGGGTCGCGCCGACATCGACGCGGCACCGCTGCGCATCGGCACGCGCGCCGGCATCAAGACCCTGACGCGCAGCGACCTCGGGTTCGAGGTCGACCTCGGCGTCTTCGCCATCGACGGCGAGACCGTCGTCAAGGCGCGGGGACTCGACGTCGCCCGCCCCGGCCAAGGCGTCGACGTCGGCAACCCGCACGTCGTCGTGGCGCTCTCCAGCGCGGGCGAGCTCGAGGAGCTCGATCTCACGGTGCAGCCGTTGCTGCATCCGGAGCCGGTCGCCGGGGCGAACGTGGAGTTCGTGGTGCCGGCCGATCCGCTCGTCAAGAACGGCGTCGGCAGCATCCGTATGCGGGTCTTCGAGCGCGGGGTGGGTGAAACGCTCTCTTGCGGCACGGGTGTCGCAGCAGCGGCGCTCGCCGTCCGCCATTGGGCCGGACCCGCGGCGCCCGATCGTTGGAGTGTTGAGGTGCCCGGCGGCATACTCGGCGTCCGCATCGTCGCCGATGCCGACGGCGACCACGTGCTGCTGTCGGGTCCGGCGACCCTCGTCTACTCGGGCGAGGTGCGCCTGGCCTGA
PROTEIN sequence
Length: 288
VAEPIAFTKGHGTGNDFVIVPDDEGVLDLSDSQVAALCDRRFGIGGDGILRVVRSARIREGEATADAEWFMDYRNADGSAAEMCGNGTRVFAKYLVDTGRADIDAAPLRIGTRAGIKTLTRSDLGFEVDLGVFAIDGETVVKARGLDVARPGQGVDVGNPHVVVALSSAGELEELDLTVQPLLHPEPVAGANVEFVVPADPLVKNGVGSIRMRVFERGVGETLSCGTGVAAAALAVRHWAGPAAPDRWSVEVPGGILGVRIVADADGDHVLLSGPATLVYSGEVRLA*