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scnpilot_p_inoc_scaffold_1117_curated_21

Organism: scnpilot_dereplicated_Microbacterium_7

near complete RP 45 / 55 MC: 4 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 17764..18144

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L20 n=2 Tax=Microbacterium RepID=H8E2D8_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 126.0
  • Bit_score: 247
  • Evalue 5.80e-63
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 126.0
  • Bit_score: 247
  • Evalue 8.10e-63
rplT; ribosomal protein L20; K02887 large subunit ribosomal protein L20 similarity KEGG
DB: KEGG
  • Identity: 94.4
  • Coverage: 126.0
  • Bit_score: 237
  • Evalue 1.90e-60

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Taxonomy

Microbacterium hominis → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 381
ATGGCTAGAGTCAAGCGGGCCGTCAACGCCCACAAGAAGCGTCGCGTCATCCTCGAGCGCGCATCCGGTTACCGCGGGCAGCGTTCGCGCCTGTACCGCAAGGCCAAGGAGCAGGTCACCCACTCGCTGGTCTACGCGTACCGTGACCGCCGCAAGCGCAAGGGCGACTTCCGCCGCCTGTGGATCCAGCGCATCAACGCCGCGGCGCGTCAGAACGGCATCACCTACAACCGCTTCATCCAGGGCCTCGGCCTGGCGGGCGTGCAGGTCGACCGTCGCATGCTGGCCGAGCTGGCCGTCAACGAGCCGGCCACCTTCGCCTCGCTCGTCGAGACCGCGAAGAAGGCGCTGCCGGCGGACGTGAACGCGCCCAAGGCGTAA
PROTEIN sequence
Length: 127
MARVKRAVNAHKKRRVILERASGYRGQRSRLYRKAKEQVTHSLVYAYRDRRKRKGDFRRLWIQRINAAARQNGITYNRFIQGLGLAGVQVDRRMLAELAVNEPATFASLVETAKKALPADVNAPKA*