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scnpilot_p_inoc_scaffold_8221_curated_2

Organism: scnpilot_dereplicated_Microbacterium_7

near complete RP 45 / 55 MC: 4 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(789..992)

Top 3 Functional Annotations

Value Algorithm Source
Cold-shock protein DNA-binding protein n=2 Tax=Microbacterium RepID=H8E5X0_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 67.0
  • Bit_score: 138
  • Evalue 2.00e-30
Cold shock protein (Beta-ribbon, CspA family) {ECO:0000313|EMBL:EPD85111.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 67.0
  • Bit_score: 138
  • Evalue 2.80e-30
scoF4; cold shock proteins; K03704 cold shock protein (beta-ribbon, CspA family) similarity KEGG
DB: KEGG
  • Identity: 89.6
  • Coverage: 67.0
  • Bit_score: 129
  • Evalue 5.10e-28

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Taxonomy

Microbacterium sp. oral taxon 186 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 204
ATGGCCCAAGGTACCGTCAAGTGGTTCAACGCCGAGAAGGGTTTCGGCTTCATCACCGTGACCGACGGCCAGGACGTGTTCGTCCACTACTCCAACATCGACATGTCGGGATTCCGCGTCCTGGAGGAGGGGCAGACGGTCGAGTTCACCGTCGGCGCCGGTCAGAAGGGCCCGCAGGCCGAGTCGGTCCGCGTCGTCGCCTGA
PROTEIN sequence
Length: 68
MAQGTVKWFNAEKGFGFITVTDGQDVFVHYSNIDMSGFRVLEEGQTVEFTVGAGQKGPQAESVRVVA*