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scnpilot_p_inoc_scaffold_3740_curated_10

Organism: scnpilot_dereplicated_Microbacterium_7

near complete RP 45 / 55 MC: 4 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(8911..9189)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 92.0
  • Bit_score: 185
  • Evalue 3.60e-44
rpoC; DNA-directed RNA polymerase, beta' subunit/160 kD subunit; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 95.7
  • Coverage: 92.0
  • Bit_score: 180
  • Evalue 3.40e-43
DNA-directed RNA polymerase subunit beta' n=2 Tax=Microbacterium RepID=H8E542_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 92.0
  • Bit_score: 185
  • Evalue 2.60e-44

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Taxonomy

Microbacterium sp. oral taxon 186 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 279
CAGGAGACCACCCGCGTCCTGACGCAGGCGGCCATGGAGGGCAAGAGCGACCCGCTCGTCGGCCTCAAGGAGAACGTCATCATCGGAAAGCTCATCCCCGCCGGCACCGGCCTTGCGAAGTACCGCAACGTCGTGGTCGAGGCGACGGAGGAGGCCAAGAGCGAGCGGTACCCCAACCGCATCTTCGCCTCGGACGGCGCGTACAGCGACGCCGACCTGAGCTACGTCGACTTCGACAGCTTCTCGACGGACGACTTCACGCCCGGCACCTACAACTGA
PROTEIN sequence
Length: 93
QETTRVLTQAAMEGKSDPLVGLKENVIIGKLIPAGTGLAKYRNVVVEATEEAKSERYPNRIFASDGAYSDADLSYVDFDSFSTDDFTPGTYN*