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scnpilot_p_inoc_scaffold_4512_curated_6

Organism: scnpilot_dereplicated_Microbacterium_7

near complete RP 45 / 55 MC: 4 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 5621..6217

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 region 2 n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=E2SDK9_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 46.9
  • Coverage: 175.0
  • Bit_score: 144
  • Evalue 1.40e-31
Sigma-70 region 2 {ECO:0000313|EMBL:EFQ82586.1}; TaxID=585531 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Aeromicrobium.;" source="Aeromicrobium marinum DSM 15272.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.9
  • Coverage: 175.0
  • Bit_score: 144
  • Evalue 2.00e-31
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 39.7
  • Coverage: 174.0
  • Bit_score: 124
  • Evalue 3.60e-26

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Taxonomy

Aeromicrobium marinum → Aeromicrobium → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 597
GTGGCGGAGCCCGCGCGCGCGTCCCCGGATCGGCAAGATTTCGCATCGGCCGATCATGTCGAAGACGATGTGCCACTGCTGCGACGACTGCGCGATGGAGACGACACCGCTCTGAGCGAACTCCATGACCGCCACGTCCGGGCGGTGTATCTGCTCGCGCGGAGCAAGGTTGACTCCGCGTCAGACGCCGAGGAAGTGACCCAAGACGCGTTTCTGCTGTTGTGGCGCAAGTGCCGTCGTATTGACCTAACCGGCACCTCTTGCCTGCCGTGGTTGCTGACCACTGCCAACTACCTTGCCCTCAACGTTCAGCGGGCAAGTAGGCGTCTGACGCAGCGGGTCACGACTGCGCTGAGTGAAGACGACCTCACCTCCCCGCGCGAGGTGGACGCCGAAGCAGCGCGGAACATGGAACTCGAACAGGTCGTAAGGATCGTTGCGGCCCTTCCGCAGATCGACCAAGACGTATTTCGGCTCTGCGTTGTCGAGGGACTCAGCTACAAGCAGGCCGCGTACCAGCTCCGCACCAGTCACTCGGCTGTACGGAACCGCCTGTCCCGGGTGCGCGGAGCGTTGAGGAAGCAGATAGACCAATGA
PROTEIN sequence
Length: 199
VAEPARASPDRQDFASADHVEDDVPLLRRLRDGDDTALSELHDRHVRAVYLLARSKVDSASDAEEVTQDAFLLLWRKCRRIDLTGTSCLPWLLTTANYLALNVQRASRRLTQRVTTALSEDDLTSPREVDAEAARNMELEQVVRIVAALPQIDQDVFRLCVVEGLSYKQAAYQLRTSHSAVRNRLSRVRGALRKQIDQ*