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scnpilot_p_inoc_scaffold_728_curated_29

Organism: scnpilot_dereplicated_Microbacterium_7

near complete RP 45 / 55 MC: 4 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(32527..33516)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 329.0
  • Bit_score: 634
  • Evalue 8.00e-179
rpoA; DNA-directed RNA polymerase, alpha subunit/40 kD subunit; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 95.4
  • Coverage: 329.0
  • Bit_score: 612
  • Evalue 9.60e-173
DNA-directed RNA polymerase subunit alpha n=2 Tax=Microbacterium RepID=H8E4Z7_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 329.0
  • Bit_score: 634
  • Evalue 5.70e-179

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Taxonomy

Microbacterium sp. oral taxon 186 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 990
GTGCTCATTGCACAGCGTCCCACTCTGACCGAGGAGAAGATCGGCGAGTTCCGCAGCCGCTTCGTCATCGAGCCGCTGGAGCCAGGCTTCGGCTACACGATCGGCAACGCGCTGCGCCGCAGCCTGCTGTCCTCGATCCCCGGCGCGGCTGTCACCAGCATCCGCATCGACGGCGTGCTGCACGAGTTCAGCACCATCCCGGGCGTGAAGGAGGATGTCACCGAGATCATCCTCAACATCAAGCAGCTGGTCGTCTCCTCGGAGCGCGACGAGCCGATCACCGCGTACCTGCGCAAGACCGGCGCCGGTGAGGTCACCGCTGCCGACATCTCCGCTCCGGCGGGTGTCGAGGTGCACAACCCCGAGCTGGTCATCGCGACGCTCAACGACTCGGCGAAGTTCGAGCTGGAGCTCACGATCGAGCGCGGCCGCGGCTACGTGTCGGCCACGCAGAACCGCAACGAGTACGCCGAGGCGGGTCAGATCCCGATCGACTCGATCTACTCGCCCGTCCTGAAGGTCTCGTACCGCGTCGACGCGACCCGTGCCGGTGAGCGCACCGACTTCGACAAGCTCGTCCTGGACGTCGAGGCCAAGCCGTCGATCTCCCCGCGGGATGCCGTCGCGTCGGCCGGTCGCACGCTCACCGAGCTGTTCGGTCTCGCCCGCGAGCTGAACGTCGAGGCCGAGGGCATCGAGATCGGCCCCGCGCCGGTCGCCGAGGTTCTCACCAACGAGCTGTCGATGCCGATCGAGGACCTCGATCTGTCGGTGCGTTCGTACAACTGCCTCAAGCGTGAGGGCATCAACACGGTGTCCGAGCTGGTCGCCCTCTCCGAGACGCAGCTGATGAACATCCGCAACTTCGGTCAGAAGTCGGTCGACGAGGTGCGCGACAAGCTCGTCTCCCTCGGCCTGTCGCTGAAGGACTCGGTCCCCGGGTTCGACGGTGCGCACTTCTACGGCGGCTACGACGACGAGGCCCTCTGA
PROTEIN sequence
Length: 330
VLIAQRPTLTEEKIGEFRSRFVIEPLEPGFGYTIGNALRRSLLSSIPGAAVTSIRIDGVLHEFSTIPGVKEDVTEIILNIKQLVVSSERDEPITAYLRKTGAGEVTAADISAPAGVEVHNPELVIATLNDSAKFELELTIERGRGYVSATQNRNEYAEAGQIPIDSIYSPVLKVSYRVDATRAGERTDFDKLVLDVEAKPSISPRDAVASAGRTLTELFGLARELNVEAEGIEIGPAPVAEVLTNELSMPIEDLDLSVRSYNCLKREGINTVSELVALSETQLMNIRNFGQKSVDEVRDKLVSLGLSLKDSVPGFDGAHFYGGYDDEAL*