ggKbase home page

scnpilot_p_inoc_scaffold_2323_curated_12

Organism: scnpilot_dereplicated_Microbacterium_7

near complete RP 45 / 55 MC: 4 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 12619..12891

Top 3 Functional Annotations

Value Algorithm Source
DNA binding domain, excisionase family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RYA7_LEIAQ similarity UNIREF
DB: UNIREF100
  • Identity: 51.7
  • Coverage: 89.0
  • Bit_score: 90
  • Evalue 1.10e-15
Helix-turn-helix domain protein {ECO:0000313|EMBL:KJL40880.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.8
  • Coverage: 89.0
  • Bit_score: 176
  • Evalue 2.20e-41
putative excisionase similarity KEGG
DB: KEGG
  • Identity: 53.8
  • Coverage: 78.0
  • Bit_score: 89
  • Evalue 5.90e-16

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium ginsengisoli → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 273
GTGCTCCCTGTGAGCGGTGAGAGGGAACAGGCGCTTGACGCGCTGTTCGCTGGCCGTCCCGACGTGCTCAGCGTTGAAGACGTCGCGGAGGTACTGAACGTGACGCGCACGAACGTCTATGCGTGGCTCCGAGACGGCGTGATTCCGGGCTACAAGCTCGGGACAACGTGGCGCGTCCTGCGCGACGAGCTGAAGGCGACGATGGCGACGGGAGCGAACGCGCAGCGGCCGCGAGCCGTCTCGACGCACACCGAGGAGAGCAAGGAGAGCTGA
PROTEIN sequence
Length: 91
VLPVSGEREQALDALFAGRPDVLSVEDVAEVLNVTRTNVYAWLRDGVIPGYKLGTTWRVLRDELKATMATGANAQRPRAVSTHTEESKES*