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scnpilot_p_inoc_scaffold_792_curated_6

Organism: scnpilot_dereplicated_Microbacterium_7

near complete RP 45 / 55 MC: 4 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(4936..6579)

Top 3 Functional Annotations

Value Algorithm Source
xpbC; DNA or RNA helicase of superfamily II; K10843 DNA excision repair protein ERCC-3 [EC:3.6.4.12] similarity KEGG
DB: KEGG
  • Identity: 87.0
  • Coverage: 546.0
  • Bit_score: 955
  • Evalue 5.90e-276
DNA excision repair protein ERCC-3 n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ASK7_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 547.0
  • Bit_score: 1081
  • Evalue 0.0
DNA excision repair protein ERCC-3 {ECO:0000313|EMBL:EPD85117.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 547.0
  • Bit_score: 1081
  • Evalue 0.0

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Taxonomy

Microbacterium sp. oral taxon 186 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1644
ATGGCTGACGGCCCCCTCATCGTGCAAAGCGACCGCACCGTGCTGCTCGAAGTCGCTCACCCCCAGGCGGAGACAGCGCGGCACGAGCTCGCGATCTTCGCCGAGCTCGAGCGCGCACCCGAGCACATCCACACCTACCGGGTCACCCGGCTGGGGCTCTGGAACGCACGCGCCGCCGGCCACAGCGCCGACGACATGCTCGCCACGCTCGACCGCTGGTCCCGCTTCCCGGTGCCCGCCTCGGTGTCGATCGACATCCGCGAGACCGTCAACCGCTACGGGCGTCTGGTCATCGAGCGGGATGCCGAGGGCGCGCTCGTGCTGCGGGGCTCCGATCCCGCCGTTCTCGCCGAGATGGCCAAGAACAAGCGCATTCAGCCGCTGCTGATCGGCCACCCCTCCCCCGACACCTACGTGATCGACGCCTGGGCGCGCGGTCACATCAAGCAGGAGCTGCTGAAGATCGGGTGGCCGGCGGAGGATCACGCCGGCTACACCCCCGGCACCCCGCACGAGATCGACCTGCACGAGGACGGGTGGACCTTGCGTCCGTACCAGCGCCACGCCGTCGACATCTTCAGCGAGGGCGGCTCGGGTGTCGTCGTGCTCCCCTGCGGCGCCGGCAAAACGCTCGTGGGCGCTGCGGCGATGGCCGCGACGAAGACGACGACCCTCATCCTCGTCACCAACACCGTCAGCGCGCGCCAGTGGCGCGACGAGCTGCTCAAGCGCACCACGCTGACCCCGGAGGAGATCGGCGAGTACTCGGGTCAGACCAAGGAGATCAAGCCGGTCACCATCGCGACCTATCAGATCCTCACGGCCAAGCGGAAAGGCCAGTACGCGCACCTGGCGTTGCTGGACGCGCTGGATTGGGGCCTCATCGTCTACGACGAGGTGCATCTGCTTCCCGCTCCGGTTTTCAAGCTCACCGCCGATCTGCAGGCACGTCGCCGCCTCGGACTGACCGCGACGCTCGTCCGGGAGGACGGCCGCGAGGGGGACGTGTTCAGCCTCATCGGCCCCAAGCGCTTCGACGCCCCGTGGAAGGAGATCGAGGCCCAGGGCTTCATCTCTCCGGCCGTCTGCTACGAGGTGCGCGTCGACCTCCCGCCCTCCGACCGCATGGAATACGCGGCATCCGCCGACGACGAACGCTACCGTCTCGCCGCCACGGCTCACGCGAAGATCGGTGTGGTGAAGGATCTCGTCGCCCGTCACGCGGGAGAGCAAATCCTCGTCATCGGCCAGTATCTCGATCAGATCGACGTGCTGTCCGAGGCTCTGGACGCACCGAAGATCACCGGAGCGACGCCCGTGGACGAGCGCGAGGAGCTGTTCGCCGCCTTCCGCGAGGCGCGCCTGCCTGTCCTCGTCGTCTCGAAAGTCGCGAACTTCTCGATCGATCTGCCCGACGCCTCGGTCGCGATCCAGGTGTCGGGGTCGTTCGGCTCACGTCAGGAGGAGGCGCAGCGGCTCGGCCGGCTGCTTCGTCCCAAGTCGAACGGGCACACGGCGAGCTTCTACACGCTCATCGCACGCGACACCGTCGACCAGGACTTCGCCCAGAACCGGCAGCGCTTCCTCGCCGAGCAGGGCTACAGCTACACGATCCTGGATGCCGAGGGCATCGCCGCCGCGTAG
PROTEIN sequence
Length: 548
MADGPLIVQSDRTVLLEVAHPQAETARHELAIFAELERAPEHIHTYRVTRLGLWNARAAGHSADDMLATLDRWSRFPVPASVSIDIRETVNRYGRLVIERDAEGALVLRGSDPAVLAEMAKNKRIQPLLIGHPSPDTYVIDAWARGHIKQELLKIGWPAEDHAGYTPGTPHEIDLHEDGWTLRPYQRHAVDIFSEGGSGVVVLPCGAGKTLVGAAAMAATKTTTLILVTNTVSARQWRDELLKRTTLTPEEIGEYSGQTKEIKPVTIATYQILTAKRKGQYAHLALLDALDWGLIVYDEVHLLPAPVFKLTADLQARRRLGLTATLVREDGREGDVFSLIGPKRFDAPWKEIEAQGFISPAVCYEVRVDLPPSDRMEYAASADDERYRLAATAHAKIGVVKDLVARHAGEQILVIGQYLDQIDVLSEALDAPKITGATPVDEREELFAAFREARLPVLVVSKVANFSIDLPDASVAIQVSGSFGSRQEEAQRLGRLLRPKSNGHTASFYTLIARDTVDQDFAQNRQRFLAEQGYSYTILDAEGIAAA*