ggKbase home page

scnpilot_p_inoc_scaffold_635_curated_87

Organism: scnpilot_dereplicated_Microbacterium_7

near complete RP 45 / 55 MC: 4 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 95793..96392

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ASF4_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 199.0
  • Bit_score: 383
  • Evalue 1.40e-103
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EPD85067.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 199.0
  • Bit_score: 383
  • Evalue 2.00e-103
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 68.7
  • Coverage: 198.0
  • Bit_score: 269
  • Evalue 7.10e-70

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium sp. oral taxon 186 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 600
ATGCTGAGAGAGATGGTCATCGACGGTGTGGACGTACCCGAGGATTCGCCGGCACGCGATCACGCCGGGGAGCTTCTGGTGCGCGTCGCCGCGGGCGACCGCGCCGCGTTCGGACAGCTCTACGACATGCTCGCGCCGCGCGCGTTCGGACTCATCCTGCGCGTGCTCGTGAACCGAGCGCTCAGCGAAGAAGTGCTCCAGGACGTGTTTCTCGAGGTGTGGCAATCCGCTTCGGGCTTCGCTCCGAACAAGGGACAGGGACGGTCCTGGGTCCTCACCATCGCCCACCGTCGCGCCGTCGACCGGGTGCGTTCCACACGCGCCAGCACCGAGCGCGACGAGAAGGCGGGACTGCGCGAACTGAACAGCGGCCAGGACAGCGTCGACGATCAGGTCGCCCTGCGTATCGAAAGCAGGCGCGTCGCCCGAGCGATGGACGCACTTCCCGATGCGCAACGCGAAGCACTGCTGCTGTCGTATGTCGGGGGATATTCTCAGAGCGAGATCGCCGCACTGGTGGGATCGCCCCTGGGGACGATCAAAACAAGAATGCGCGACGGTTTGTCGCGCCTGAGGCAGGAGATGGGGGTGACGTCATGA
PROTEIN sequence
Length: 200
MLREMVIDGVDVPEDSPARDHAGELLVRVAAGDRAAFGQLYDMLAPRAFGLILRVLVNRALSEEVLQDVFLEVWQSASGFAPNKGQGRSWVLTIAHRRAVDRVRSTRASTERDEKAGLRELNSGQDSVDDQVALRIESRRVARAMDALPDAQREALLLSYVGGYSQSEIAALVGSPLGTIKTRMRDGLSRLRQEMGVTS*