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scnpilot_p_inoc_scaffold_392_curated_29

Organism: scnpilot_dereplicated_Microbacterium_5

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 ASCG 12 / 38
Location: comp(33832..34212)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L20 n=2 Tax=Microbacterium RepID=H8E2D8_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 94.4
  • Coverage: 126.0
  • Bit_score: 235
  • Evalue 2.30e-59
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.4
  • Coverage: 126.0
  • Bit_score: 235
  • Evalue 3.20e-59
rplT; 50S ribosomal protein L20; K02887 large subunit ribosomal protein L20 similarity KEGG
DB: KEGG
  • Identity: 91.3
  • Coverage: 126.0
  • Bit_score: 230
  • Evalue 3.90e-58

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Taxonomy

Microbacterium sp. MRS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 381
ATGGCTAGAGTCAAGCGGGCTGTCAACGCCCACAAGAAGCGTCGCGTCATCCTCGAGCGCGCCTCCGGTTACCGCGGACAGCGTTCGCGCCTGTACCGCAAGGCGAAGGAGCAGGTCACCCACTCGCTCGTCTACGCGTACCGTGACCGTCGCAAGCGCAAGGGCGACTTCCGTCGCCTGTGGATCCAGCGCATCAACGCGGCCAGCCGCGCCAACGGCCTGACCTACAACCGCTTCATCCAGGGCCTCGGCCTCGCCGGTGTCCAGGTTGACCGTCGCATGCTCGCCGAGCTCGCCGTCGCCGACCCGAAGACTTTCACGTCGCTCGTCGAGACCGCCAAGAAGGCGCTGCCGGCCGACGTGAACGCACCGAAGGCGTAA
PROTEIN sequence
Length: 127
MARVKRAVNAHKKRRVILERASGYRGQRSRLYRKAKEQVTHSLVYAYRDRRKRKGDFRRLWIQRINAASRANGLTYNRFIQGLGLAGVQVDRRMLAELAVADPKTFTSLVETAKKALPADVNAPKA*