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scnpilot_p_inoc_scaffold_99_curated_21

Organism: scnpilot_dereplicated_Microbacterium_5

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 ASCG 12 / 38
Location: comp(17120..17806)

Top 3 Functional Annotations

Value Algorithm Source
Response regulator receiver n=2 Tax=Microbacterium RepID=H8E5Z1_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 92.1
  • Coverage: 228.0
  • Bit_score: 416
  • Evalue 1.70e-113
XRE family transcriptional regulator {ECO:0000313|EMBL:KIC60050.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.0
  • Coverage: 228.0
  • Bit_score: 418
  • Evalue 4.80e-114
response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; K07776 two-component system, OmpR family, response regulator RegX3 similarity KEGG
DB: KEGG
  • Identity: 84.2
  • Coverage: 228.0
  • Bit_score: 378
  • Evalue 2.10e-102

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Taxonomy

Microbacterium hominis → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 687
ATGACCCGCGTCCTGATCGTCGAGGACGAACCCGACCTCGCCGACCCGCTGGCCTACCTTCTGCGCCGCGAGGGCTTCGACGTCGAGATCGCCGAAGACGGCCCCGCCGCCCTCGAGGCCTTCTCGGCGCGCGGCGCCGACATCGTGCTGCTCGACCTCATGCTGCCCGGGATGCCCGGGACGGAGGTCTGCCGGGTCATCCGCACGACCTCGAAGACGCCGATCATCATGCTGACAGCGAAGGACTCTGAGGTCGACATCGTCGTCGGTCTCGAGCTCGGCGCCGACGACTACGTCACGAAGCCGTACTCGTCGCGCGAGCTGCTCGCGCGCATGCGGGCTGTGCTGCGTCGCTCGGAGGTCGGCGAAGAGGTCGACCTCGACGACCGGATCGTCGACGGCGGCCGTGTCGTGATCGACATCGATCGCCACACGGTGTCGGTGGACGGCGAGATCATCCCCATGCCTCTGAAGGAGTTCGAGCTGCTCGAGGTGCTCATGCGCAACGCCGGCCGCGTGCTGACCCGCGGTCAGCTGATTGACCGCGTGTGGGGGAGCGACTACTTCGGCGACACCAAGACGCTCGACGTGCACATCAAGCGCATCCGCTCGCGCATCGAGCGCAACCCTGGCGAGCCGGTGATGCTGCTCACCGTGCGCGGGCTCGGCTACCGCTTCGAGGCGTAA
PROTEIN sequence
Length: 229
MTRVLIVEDEPDLADPLAYLLRREGFDVEIAEDGPAALEAFSARGADIVLLDLMLPGMPGTEVCRVIRTTSKTPIIMLTAKDSEVDIVVGLELGADDYVTKPYSSRELLARMRAVLRRSEVGEEVDLDDRIVDGGRVVIDIDRHTVSVDGEIIPMPLKEFELLEVLMRNAGRVLTRGQLIDRVWGSDYFGDTKTLDVHIKRIRSRIERNPGEPVMLLTVRGLGYRFEA*