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scnpilot_p_inoc_scaffold_253_curated_38

Organism: scnpilot_dereplicated_Microbacterium_5

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 ASCG 12 / 38
Location: 39585..40832

Top 3 Functional Annotations

Value Algorithm Source
pilus biosynthesis protein PilC n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI000287BB8C similarity UNIREF
DB: UNIREF100
  • Identity: 54.1
  • Coverage: 412.0
  • Bit_score: 440
  • Evalue 2.60e-120
Pilus assembly protein PilC {ECO:0000313|EMBL:KGJ82341.1}; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkundense.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.8
  • Coverage: 403.0
  • Bit_score: 451
  • Evalue 9.30e-124
type II secretory pathway, component PulF; K02653 type IV pilus assembly protein PilC similarity KEGG
DB: KEGG
  • Identity: 52.9
  • Coverage: 414.0
  • Bit_score: 421
  • Evalue 3.00e-115

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Taxonomy

Cryobacterium roopkundense → Cryobacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1248
ATGAGCACAACGGCGGCCAAGAGTGCACAGTGGGCCTTCAAGGGCATCGACTCGAGCGGCAAGAAGGTCAAGGGCGTGCTGGATGCCTCCAGTGAGGCTCAGGCGATCCAGCAGCTGAAGAACCGCGCGATCATCCCCGAGAAGCTCGCTGAGAAGGGCGCCGGCACGGGCCTGAATCAAGAGATCAACATCCCCGGGCTCGAGAAGCGACCGTCGCTCAAAGACCTCGCCCTGCTCACTCGCCAGTTGGCGACGATGGTGAGCGCGGGCGTGTCGCTGCTGCGAGCCCTGAACATCGTGCAGGCGCAGATCGACAACACCATGTTGCGGCGCACCGTGGCAGACATCGCGGCCCGCGTCGAGGGCGGCGCGTCGTTCTCGACGGCGCTCGAAGAGTTCCCGCTGATCATCCCGCCGATCATGGTGCACCTCGTGCGTGCCGGTGAGACCGGCGGTTTCCTGGACAGATCGCTCGTCATGGTCGCCGACAACTTCGAGGCCGAGACGAAACTGCGCAGCAAGGTCAAGGCCGCGCTGACGTACCCGATCGTCGTCCTCATCGTCGCGCTGCTCGCGGTGGCTGCGATGCTGATCTTCATCGTGCCGGTGTTCGAGAAGATGTTCGCCGACCTCGGCGGCACGCTACCCGCGCCTACCCAGTTGCTGGTCGACCTCTCGCACGCGATGCCGATCGTGCTGCCGATCCTGCTCGTGCTGGGCGTCGCCTGGGCGATCTGGTGGGGGCGCAACAAGAACACCGAGGCCGTACGGCGCGTCGTCGACCCGCTCAAGCTCAAAGTCCCCGTGTTCGGCAAGCTCAACACGAAGATCGCGCTGACGCGGTTCACGCGCAACTTCGCGACGATGCTCGCCTCGGGTGTGCCGATTCTGCAGGCGCTGTCGATCGTCGGCGCCACGAGCGACAACCACGTGATCAGCTCGTCGCTGCGCAAGGTGCAAGACGGCGTGCGCGAGGGCCGGCCGATCGGGGAGTCACTTGCGCAGGCCGAGATCTTCCCCGACATGCTCGTGCAGATGGTCGGGATCGGTGAGGAGTCGGGCTCGATCGACCAGATGCTCGAGAAGACCGCCGACTTCTACGACGACGAGGTCGAGACGATGAGCTCGCAGCTGACCGCGATGCTCGAGCCGCTCATGATCGTGTTCATGGGTGGACTGCTGGGCTTCATGATCGTCGCGCTGTACATGCCGATGTTCATGATCTTCCAGGAGATCCAGAGTATGTAA
PROTEIN sequence
Length: 416
MSTTAAKSAQWAFKGIDSSGKKVKGVLDASSEAQAIQQLKNRAIIPEKLAEKGAGTGLNQEINIPGLEKRPSLKDLALLTRQLATMVSAGVSLLRALNIVQAQIDNTMLRRTVADIAARVEGGASFSTALEEFPLIIPPIMVHLVRAGETGGFLDRSLVMVADNFEAETKLRSKVKAALTYPIVVLIVALLAVAAMLIFIVPVFEKMFADLGGTLPAPTQLLVDLSHAMPIVLPILLVLGVAWAIWWGRNKNTEAVRRVVDPLKLKVPVFGKLNTKIALTRFTRNFATMLASGVPILQALSIVGATSDNHVISSSLRKVQDGVREGRPIGESLAQAEIFPDMLVQMVGIGEESGSIDQMLEKTADFYDDEVETMSSQLTAMLEPLMIVFMGGLLGFMIVALYMPMFMIFQEIQSM*