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scnpilot_p_inoc_scaffold_182_curated_16

Organism: scnpilot_dereplicated_Microbacterium_5

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 ASCG 12 / 38
Location: comp(12953..15007)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.9
  • Coverage: 697.0
  • Bit_score: 932
  • Evalue 3.00e-268
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035FDA46 similarity UNIREF
DB: UNIREF100
  • Identity: 74.5
  • Coverage: 738.0
  • Bit_score: 923
  • Evalue 1.70e-265
rho; transcription termination factor; K03628 transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 67.9
  • Coverage: 733.0
  • Bit_score: 841
  • Evalue 2.60e-241

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Taxonomy

Microbacterium sp. MRS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2055
GTGGAGTCCCTCTCCGAGATCCAGTCCGAGACCGACGAAGCCCCGCGCGAGGATGCCGCGGCGCAGGAGGTCGTGAACACCGAGAGCCCTGTCGCGGAGGTCGTGACGGAGGCCGCCGAGGCTGTCGTCGAGCCCGCCGCCGAGGCGGAGGCACCCGTCGAGGAGCCCGCCGCTGAAGAGGCTGCTGCTGAAGAGGCGGCTGTCGAGGCGCCGGCCGAGCAGCCTGCCGCCGAGGTCGTGGCGGAGGCCGCGCCCGAGGCTGTTGTCGAGCCCGAGGTTGCTGCTGAGTCTGCGCCCGAGGCCGCTGTCGAGCCCGCCGCGGAGGTCCTCGAGGCCCCGCCCGTGAAGGCGCCGCGCAAGCGCGCGCCGCGCCGCGCGAAGAGCACCGACGTGCTCGCCGCCGAGGCTCCCGCGGCCGACGCTGCTCCCGTGGATGCACCCGCCGAGGCTGAGGCCGCCGTTCCCGCCGAGGAACCGGCCGCCGAGGCATCCGCTGTCGAGGCATCCGACGCGCCAGCTGAGGGTGACGCAGCCGCCGCGCCCGTCGACGGTGACGCCGCCGCGCCCGTCGCCGAGGGCGCTGAGACCCCCGCCGAAAGTGCCGAGGCCGCCGCTGAAGGCGCCGAGGCGCCCGCCGAGAGCGAGACGCCGACGCGCAGCCGCAGCCGGTCGCGCAGCCGCAGCCGCAGCCGCGGTCAGAAGACGGACGGCGGCCAGAACAACACCCAGAACGGCCAGGGCGGGCAGAACGCGCCGGCCGCCGACGAGGCCAAGTCCGACTCCGACGACGAGCAGGCCCAGGGCCGCGGCCGGCAGCGCAACAAGCGCCGTCCGCAGGGCCAGGGCGGCGACGAGTTCGAGACCGAGATCGGCGAGGACGACATCCTCATCCCGATCGCGGGCATCCTCGACGTGCTCGACAACTACGCGTTCGTCCGCACTACCGGGTACCTGCCCGGCACAAGCGACGTCTACGTCTCGCTCGGTCAGGTCAAGAAGTACAACCTGCGCAAGGGTGACGCCGTCGTCGGTGCCATCAAGCAGCCGCGCGAGGGTGAGCAGTCCAGCCGCCAGAAGTACAACGCGCTGGTCAAGGTCGACGCGATCAACGGCCTGTCGGTCGACGACGCCGCGAACCGCGTCGAGTTCGGCAAGCTGACGCCGCTCTACCCGCAGGACCGCCTGCGCCTGGAGACCGCGCCCGAAAAGCTGACCCAGCGCATCATCGACCTCGTCGCCCCCATCGGCAAGGGCCAGCGCGGCCTCATCGTCGCGCCGCCCAAGGCCGGCAAGACGATCGTGCTGCAGCAGATCGCGAACGCGATCGCGACGAACAACCCCGAGGTCCACCTCATGGTCGTGCTCGTCGACGAACGGCCCGAAGAGGTCACCGACATGCAGCGCACCGTCAAGGGCGAGGTCATCGCCTCGACCTTCGACCGCCCCGCCGAAGACCACACGACGGTCGCCGAGCTCGCGATCGAGCGCGCCAAGCGTCTCGTCGAGCTGGGCCGCGACGTCGTCGTGCTGCTCGACTCGATCACGCGCCTCGGTCGCGCCTACAACGTCTCGGCCCCGACGAGCGGCCGCGTGCTGTCCGGCGGCGTCGACGCGTCGGCGCTGTACCCGCCCAAGCGCTTCTTCGGTGCCGCGCGCAACATCGAGAACGGCGGATCGCTCACGATCCTCGCGACGGCGCTCGTCGAGACCGGCTCGAAGATGGACGATGTCATCTTCGAGGAGTTCAAGGGCACCGGCAACAGCGAGCTGCGTCTGAGCCGCCAGCTGGCCGACAAGCGCATCTTCCCGGCGGTCGACGTCAACGCGTCGTCCACGCGTCGCGAAGAGATGCTGCTGAGCCCCGACGAGGTCAAGATCACCTGGAAGCTGCGTCGCGCCCTCGCGGGCCTCGACCCGCAGCAGGCGCTCGAGGTCGTGCTCGGCAAGCTCAAGGAGACCTCGAGCAACGTCGAGTTCCTCGTGCAGATGCAGAAGTCGATCCCGGCTCCTGCCGCCGGCGGCCACAGCCACGGGCACGAGAACAGCATCCGCTGA
PROTEIN sequence
Length: 685
VESLSEIQSETDEAPREDAAAQEVVNTESPVAEVVTEAAEAVVEPAAEAEAPVEEPAAEEAAAEEAAVEAPAEQPAAEVVAEAAPEAVVEPEVAAESAPEAAVEPAAEVLEAPPVKAPRKRAPRRAKSTDVLAAEAPAADAAPVDAPAEAEAAVPAEEPAAEASAVEASDAPAEGDAAAAPVDGDAAAPVAEGAETPAESAEAAAEGAEAPAESETPTRSRSRSRSRSRSRGQKTDGGQNNTQNGQGGQNAPAADEAKSDSDDEQAQGRGRQRNKRRPQGQGGDEFETEIGEDDILIPIAGILDVLDNYAFVRTTGYLPGTSDVYVSLGQVKKYNLRKGDAVVGAIKQPREGEQSSRQKYNALVKVDAINGLSVDDAANRVEFGKLTPLYPQDRLRLETAPEKLTQRIIDLVAPIGKGQRGLIVAPPKAGKTIVLQQIANAIATNNPEVHLMVVLVDERPEEVTDMQRTVKGEVIASTFDRPAEDHTTVAELAIERAKRLVELGRDVVVLLDSITRLGRAYNVSAPTSGRVLSGGVDASALYPPKRFFGAARNIENGGSLTILATALVETGSKMDDVIFEEFKGTGNSELRLSRQLADKRIFPAVDVNASSTRREEMLLSPDEVKITWKLRRALAGLDPQQALEVVLGKLKETSSNVEFLVQMQKSIPAPAAGGHSHGHENSIR*