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scnpilot_p_inoc_scaffold_974_curated_7

Organism: scnpilot_dereplicated_Microbacterium_5

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 ASCG 12 / 38
Location: 5448..6653

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide biosynthesis protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E5C8_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 57.4
  • Coverage: 401.0
  • Bit_score: 436
  • Evalue 3.60e-119
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:EIC08067.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.4
  • Coverage: 401.0
  • Bit_score: 436
  • Evalue 5.10e-119
lipopolysaccharide biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 41.3
  • Coverage: 322.0
  • Bit_score: 216
  • Evalue 1.40e-53

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Taxonomy

Microbacterium laevaniformans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1206
ATGTCCGTCACCGTGAAAGCCGCCGATGCGGCACAGTTCCTGTCCCTCGTCCCGCAACTGCTCGGCTGCACGCCGACGCAGAGCCTCGTGCTCGTCCCGATGGCCGCCGGCCGCAGCCTGGGCGCGCTGCGCCTCGACCTTCCGCCCGATGATCTGGCCGACGCCGTGGCCTCCAGCGCGATCGGCATGCTGTGCCGCATCGGCGAGGCCGACGCGATGATCGCCGTCGTGTACACCGACGAGGCGATCGCCGGGGCCGCAACGCCGCCTGGCGAGGCCGCCGCTCTGCCCGGCGGCGCAGCCGCGCTGCCCGGCGACGCAGCCACCGAAGCCGCCGTGCTGCCCGGCGACGCGCTCATCTCGCTGCTGGGCGCGAAGGCGGATGCCTGCGGGCTGCGCCTCGTTGACGCGCTGACCGTCGCCGCCGACGGCTGGGGGTCGCACCTCGAACCGGATCTGCCGCCCGGCGGGCATCCGCTGGATGCGCTGCAGGTGCGCGGGGCGGATGCGTCGGCCCTCGCCGCCGGAGGTGTCGACGCGTCCCGCGGAGACCAGGCGTCGGGTGCGACGCTGCCGCAGGTCGGTCAGACCGCGCGTCGCGCCGTCGCGCAGTCGCTGCGGTCGCTCAGCTCGGCGCTCGAGGTGATCTGTGGCATCCCCTCGGTCGCCGGTGCTGACTCTCGCATCGACCCGGCTGCGCTCGAGGCCGCGTGTGAGCTGGACGATCTGCCTGCCCTGTTCGAGGAGGCGCTGCGCTGGCAACCCAGTGAAACGCCGATGCACACCGCGATGCTGGGCTGGTGCCTGTCGCGGCCGTCGCTGCGCGACGTCGCGCTCGTGCAGTGGGCGACGGATTCCGCGGGCGGCGACATCGCGATGGAGGCCCAGCGACGGTGGGAGGACGGCGCGGACTACCCCGCCGACCTCGCGTCGCTCATGTGGGGCGAAGGCCCGCGGCCCGACGCGGAGCGCCTCGAGTCTGCGCTGCGGCTCGTGCGCGAGGTCGCCGCCCTGCTGCCGAAGAAGCAGCGCCCCGGCCCGCTCGCGATGTGCGCGTGGCTGTCGTGGGCGCTCGGCCGCTCCTCGCACGCCGACCGCTACGCCGGAATGGCTCTCGCGATCGACCGCCGCCACGGCCTGGCCGACATCGTGCGGTCCTTCGCTCAGGCGGGCCACCTGCCCGACTGGGCCTTCCGCCTCGAATGA
PROTEIN sequence
Length: 402
MSVTVKAADAAQFLSLVPQLLGCTPTQSLVLVPMAAGRSLGALRLDLPPDDLADAVASSAIGMLCRIGEADAMIAVVYTDEAIAGAATPPGEAAALPGGAAALPGDAATEAAVLPGDALISLLGAKADACGLRLVDALTVAADGWGSHLEPDLPPGGHPLDALQVRGADASALAAGGVDASRGDQASGATLPQVGQTARRAVAQSLRSLSSALEVICGIPSVAGADSRIDPAALEAACELDDLPALFEEALRWQPSETPMHTAMLGWCLSRPSLRDVALVQWATDSAGGDIAMEAQRRWEDGADYPADLASLMWGEGPRPDAERLESALRLVREVAALLPKKQRPGPLAMCAWLSWALGRSSHADRYAGMALAIDRRHGLADIVRSFAQAGHLPDWAFRLE*