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scnpilot_p_inoc_scaffold_120_curated

Search features with annotation key words

Displaying items 271-300 of 471 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_120_curated_271
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

282975..283910
DNA (936bp) protein (312aa)
ABC transporter ATP-binding protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034AD05B
multidrug ABC transporter ATPase; K09687 antibiotic transport system ATP-binding protein
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:BAJ74502.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_120_curated_272
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

283907..284704
DNA (798bp) protein (266aa)
membrane protein n=1 Tax=Microbacterium sp. B19 RepID=UPI0003471010
multidrug ABC transporter permease; K09686 antibiotic transport system permease protein
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_120_curated_273
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

284725..285834
DNA (1110bp) protein (370aa)
signal transduction histidine kinase; K07778 two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
histidine kinase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B40103
Signal transduction histidine kinase {ECO:0000313|EMBL:BAJ74500.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_120_curated_274
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

285886..286494
DNA (609bp) protein (203aa)
MerR family transcriptional regulator n=1 Tax=Microbacterium sp. B19 RepID=UPI000348709F
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; K07693 two-component system, NarL family, response regulator DesR
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain {ECO:0000313|EMBL:BAJ74499.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_120_curated_275
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(286496..286789)
DNA (294bp) protein (98aa)
Catalase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N962_MICTS
catalase
Catalase {ECO:0000313|EMBL:BAJ74498.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_120_curated_276
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(286777..287649)
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KFM9_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJQ55600.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
hypothetical protein
scnpilot_p_inoc_scaffold_120_curated_277
unknown

Not on your lists

287890..288162
DNA (273bp) protein (91aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_120_curated_278
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

288253..288714
DNA (462bp) protein (154aa)
MerR family transcriptional regulator n=1 Tax=Microbacterium sp. B19 RepID=UPI000348709F
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; K07693 two-component system, NarL family, response regulator DesR
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain {ECO:0000313|EMBL:BAJ74499.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_120_curated_279
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

289073..289957
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003665AC7
Uncharacterized protein {ECO:0000313|EMBL:KJL24408.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein
scnpilot_p_inoc_scaffold_120_curated_280
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(289954..290349)
DNA (396bp) protein (132aa)
nudix hydrolase; K03574 7,8-dihydro-8-oxoguanine triphosphatase [EC:3.6.1.-]
Putative nudix hydrolase n=1 Tax=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1) RepID=B0RHY1_CLAMS
DNA mismatch repair protein MutT {ECO:0000313|EMBL:KHK96641.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
scnpilot_p_inoc_scaffold_120_curated_281
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(290551..290817)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KFM9_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EQM75830.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
scnpilot_p_inoc_scaffold_120_curated_282
Rhodococcus rhodochrous, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

291262..292605
DNA (1344bp) protein (448aa)
Uncharacterized protein n=1 Tax=Agrococcus pavilionensis RW1 RepID=U1LN85_9MICO
Uncharacterized protein {ECO:0000313|EMBL:ETT28614.1}; TaxID=1429046 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus rhodochrous ATCC 21198.;"
hypothetical protein
scnpilot_p_inoc_scaffold_120_curated_283
Rhodococcus rhodochrous, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

292917..294230
DNA (1314bp) protein (438aa)
Uncharacterized protein {ECO:0000313|EMBL:ETT28614.1}; TaxID=1429046 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus rhodochrous ATCC 21198.;"
scnpilot_p_inoc_scaffold_120_curated_284
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(294254..294637)
DNA (384bp) protein (128aa)
UDP-glucose 4-epimerase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034A0303
UDP-glucose 4-epimerase {ECO:0000313|EMBL:KEP72808.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
hypothetical protein; K09959 hypothetical protein
scnpilot_p_inoc_scaffold_120_curated_285
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(294748..296298)
DNA (1551bp) protein (517aa)
NAD-dependent aldehyde dehydrogenase; K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
aldehyde dehydrogenase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003479EEA
Aldehyde dehydrogenase {ECO:0000313|EMBL:KEP74921.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
scnpilot_p_inoc_scaffold_120_curated_286
Sanguibacter keddieii, Sanguibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(296495..297070)
DNA (576bp) protein (192aa)
Acetyltransferase (Isoleucine patch superfamily) n=1 Tax=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) RepID=D1BE70_SANKS
isoleucine patch superfamily acetyltransferase
Acetyltransferase (Isoleucine patch superfamily) {ECO:0000313|EMBL:ACZ21148.1}; TaxID=446469 species="Bacteria; Actinobacteria; Micrococcales; Sanguibacteraceae; Sanguibacter.;" source="Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 /; ST-74).;"
scnpilot_p_inoc_scaffold_120_curated_287
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(297067..297933)
DNA (867bp) protein (289aa)
Helix-turn-helix domain protein n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PLK2_KRIFD
Uncharacterized protein {ECO:0000313|EMBL:KJL19993.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
helix-turn-helix domain-containing protein
scnpilot_p_inoc_scaffold_120_curated_288
Rhodococcus sp. AD45, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

298061..298480
DNA (420bp) protein (140aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C601_BEUC1
Cupin domain protein {ECO:0000313|EMBL:KJF24376.1}; TaxID=103808 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. AD45.;"
cupin
scnpilot_p_inoc_scaffold_120_curated_289
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

298477..299511
DNA (1035bp) protein (345aa)
IMP dehydrogenase n=1 Tax=Microbacterium sp. 11MF RepID=UPI00037951D3
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:EZP28204.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
theronine dehydrogenase-like Zn-dependent dehydrogenase
scnpilot_p_inoc_scaffold_120_curated_290
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(299575..300099)
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI000348FC9A
malate/L-lactate dehydrogenase
Malate/L-lactate dehydrogenase {ECO:0000313|EMBL:BAJ74493.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_120_curated_291
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(300128..301435)
DNA (1308bp) protein (436aa)
transcriptional regulator n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B560E2
transcriptional activator of acetoin/glycerol metabolism
Transcriptional activator of acetoin/glycerol metabolism {ECO:0000313|EMBL:BAJ74492.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_120_curated_292
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

301692..302726
DNA (1035bp) protein (345aa)
Zn-dependent alcohol dehydrogenase; K13953 alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
alcohol dehydrogenase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B53717
Zn-dependent alcohol dehydrogenase {ECO:0000313|EMBL:BAJ74491.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_120_curated_293
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

302929..303288
DNA (360bp) protein (120aa)
PadR family transcriptional regulator n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B6BAC2
transcriptional regulator; K10947 PadR family transcriptional regulator, regulatory protein PadR
Predicted transcriptional regulator {ECO:0000313|EMBL:BAJ74490.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_120_curated_294
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

303285..304391
DNA (1107bp) protein (369aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034B49F9
dolichyl-phosphate-mannose--protein O-mannosyl transferase
Dolichyl-phosphate-mannose--protein O-mannosyl transferase {ECO:0000313|EMBL:BAJ74489.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_120_curated_295
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(304698..306125)
DNA (1428bp) protein (476aa)
pcnB; tRNA nucleotidyltransferase/poly(A) polymerase; K00970 poly(A) polymerase [EC:2.7.7.19]
tRNA nucleotidyltransferase/poly(A) polymerase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N952_MICTS
RNA nucleotidyltransferase {ECO:0000313|EMBL:KEP74917.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
scnpilot_p_inoc_scaffold_120_curated_296
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(306259..307770)
DNA (1512bp) protein (504aa)
SAM-dependent methyltransferase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034B3656
methylase of polypeptide chain release factors
Methylase of polypeptide chain release factors {ECO:0000313|EMBL:BAJ74487.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_120_curated_297
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

307869..310019
DNA (2151bp) protein (717aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI000348A93C
pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component {ECO:0000313|EMBL:BAJ74486.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_120_curated_298
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

310114..311100
DNA (987bp) protein (329aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
trxB; thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9]
thioredoxin reductase n=1 Tax=Microbacterium sp. B19 RepID=UPI000344D4CA
scnpilot_p_inoc_scaffold_120_curated_299
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

311163..311486
DNA (324bp) protein (108aa)
thioredoxin n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B7A41A
trxA; thiol-disulfide isomerase and thioredoxins; K03671 thioredoxin 1
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_120_curated_300
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(311603..311950)
DNA (348bp) protein (116aa)
tryptophan synthase subunit alpha n=1 Tax=Microbacterium sp. B19 RepID=UPI000349C0F0
Tryptophan synthase subunit alpha {ECO:0000313|EMBL:KEP74883.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
tryptophan synthase alpha chain
Displaying items 271-300 of 471 in total

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