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scnpilot_p_inoc_scaffold_249_curated_11

Organism: scnpilot_dereplicated_Microbacterium_4

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(10397..11794)

Top 3 Functional Annotations

Value Algorithm Source
DNA repair protein RadA n=1 Tax=Microbacterium sp. B19 RepID=UPI0003473F7B similarity UNIREF
DB: UNIREF100
  • Identity: 97.6
  • Coverage: 455.0
  • Bit_score: 864
  • Evalue 6.30e-248
radA; ATP-dependent serine protease; K04485 DNA repair protein RadA/Sms similarity KEGG
DB: KEGG
  • Identity: 90.8
  • Coverage: 455.0
  • Bit_score: 818
  • Evalue 1.20e-234
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.8
  • Coverage: 455.0
  • Bit_score: 818
  • Evalue 5.50e-234

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Taxonomy

Microbacterium testaceum → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1398
ATGTCGGAGCCCCCGCGTAGCCTGGGCACCATGGCATCCCGTCGCCCCTCCCCCACGGCCGCTCCGTACCGGTGCACCGAGTGCGGGTGGACGACGCTGAAGTGGGTCGGCCGCTGCGGAGAGTGCCAGTCGTGGGGAACGGTCGTCGAGGCGGCGGAGCAGACCGGCATCACGCGATCGGTCACCGCCGTCGCGCCCGCGGCGGCTCGCGCAGCCCGGCGCATCACCGAGATCGACACGCAGGACGCGCCGCGGCGCACCAGCGGGGTCGGCGAGTTCGATCGGGTGCTCGGCGGCGGGATCGTGCCCGGTGCGGCGATCCTGTTGAGCGGTGAGCCCGGCGTCGGCAAATCGACACTGCTGCTCGAGGTCGCGGCGCAGAGCGCGCGGGCCGGACGGCGCGTGCTCTACGCGAGCGGCGAGGAGTCCGCGGCGCAGGTGCGCCTCCGCGCCGAGCGCACCGGCGCGCTCCACGACGAACTGTTCCTCGCTGCCGAGACCGACCTCGCCACGATCCTCGGCCACATCGACCAGGTCGAGCCCGAGCTGCTCATCGTCGACTCGGTGCAGACGGTGTCGTCCGCGTTGAGCGACGGAGCAGCGGGACAGCCCGCGCAGGTGCGCGAGGTGGCATCCACACTCATCCGCGTCGCGAAAGACCGGGGATTGCCGGTCGTCATCGTGGGGCACGTGACGAAAGACGGCACGATCGCGGGGCCGCGCGTACTCGAGCACCTCGTCGACGTCGTGTGCCATTTCGAGGGCGACCGGCAGACGTCGCTGCGCTTCGTCCGGGCACTGAAGAACCGCTTCGGACCGACCGACGAGGTCGGATGCTTCGACATGACCGGCAGCGGCATCGCCGAGGTCAGCGACCCGAGCGCGCTGTTCCTCGGCCACGGCGATCCCGAGCCCGGGACCTGCGTGACGATCGCCATGGAAGGGCGGCGCGCGCTGCCCGTCGAGATCCAGGCGTTGACCGTGAAGCAGACGGCCCCCAACCCGCGACGCATCGTCAACGGCGTCGACTCGTCACGCGTGGCGATGGTGCTCGCGGTACTCGAGAGTCGCATGGGGGTCTCGCTCGCCGACAAAGACGTGTACGTCTCGACCGTCGGCGGAGTGCGTCTGGTCGAACCCGCGGCCGACCTGGCGATAGCCATCGCCGTGGCGAACGCCGTGCAGAACCGGAAGGTGTCGAAGCGGCTCGCGGCGATCGGCGAGCTGACGCTCACGGGTGAGATCCGCAACGTGACGCAGGCGGCGCAACGCGCATCCGAGGCCGCGCGTCTCGGGTATCACACGGTCCTCGACTCGTCGTCGCGAAAGCTCGCGCAGGCGCTCAACGAGTTGAAGGTCCGCGGAATGCCACGCGAAGAGGCCGTGCCCGAGTTCTGA
PROTEIN sequence
Length: 466
MSEPPRSLGTMASRRPSPTAAPYRCTECGWTTLKWVGRCGECQSWGTVVEAAEQTGITRSVTAVAPAAARAARRITEIDTQDAPRRTSGVGEFDRVLGGGIVPGAAILLSGEPGVGKSTLLLEVAAQSARAGRRVLYASGEESAAQVRLRAERTGALHDELFLAAETDLATILGHIDQVEPELLIVDSVQTVSSALSDGAAGQPAQVREVASTLIRVAKDRGLPVVIVGHVTKDGTIAGPRVLEHLVDVVCHFEGDRQTSLRFVRALKNRFGPTDEVGCFDMTGSGIAEVSDPSALFLGHGDPEPGTCVTIAMEGRRALPVEIQALTVKQTAPNPRRIVNGVDSSRVAMVLAVLESRMGVSLADKDVYVSTVGGVRLVEPAADLAIAIAVANAVQNRKVSKRLAAIGELTLTGEIRNVTQAAQRASEAARLGYHTVLDSSSRKLAQALNELKVRGMPREEAVPEF*