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scnpilot_p_inoc_scaffold_249_curated_122

Organism: scnpilot_dereplicated_Microbacterium_4

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 132911..136786

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 999.99
  • Bit_score: 2509
  • Evalue 0.0
rpoC; DNA-directed RNA polymerase, beta' subunit/160 kD subunit; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 98.1
  • Coverage: 999.99
  • Bit_score: 2492
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NF84_MICTS similarity UNIREF
DB: UNIREF100
  • Identity: 98.1
  • Coverage: 999.99
  • Bit_score: 2492
  • Evalue 0.0

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Taxonomy

Microbacterium sp. SUBG005 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 3876
GTGCTCGAATCAACCACTTTCGATCAGCTTCGTATCGGCCTGGCCACCGCCGACGACATCCGTCGTTGGTCCTTCGGTGAGGTCAAGAAGCCCGAAACCATCAACTACCGCACCCTGAAGCCCGAGAAGGACGGTCTGTTCGGCGAGCAGATCTTCGGACCCTCGCGTGACTGGGAGTGCGCGTGCGGAAAGTACAAGCGCGTCCGCTTCAAGGGCATCGTCTGCGAGCGCTGCGGCGTCGAGGTCACCAAGTCCTCGGTCCGTCGTGAGCGCATGGGCCACATCGAGCTCGCCGCTCCCGTGACCCACATCTGGTACTTCAAGGGCGTGCCCTCGCGCCTCGGCTACCTGCTGGACATGGCGCCGAAGGACCTCGAGAAGGTCATCTACTTCGCTGCCTACATGGTCATCTCGGTCGACGAAGATGCTCGTCACCGCGACCTGGCGACGCAGGAGAACAACATCCGTCTCGAGCTGAAGACGCTCGGCGACCGTCGCGACTCGCGCATCGCCGCTCGCCTGGCGAAGCTGGAGGAGGAGCTCGCGGCCCTCGAGGCCGAGGGTGCCAAGGCCGACCAGAAGAAGAAGGTCAAGGACGCCGCCGAGAAGGACATGACCTCGATCCGCAAGAACGCGGACGAGCAGATCGCCAAGCTCGAGCGCGTGTGGGAGGACTTCCGCACGCTCGAGGTGGGTGCGCTCAAGCCCGAGGACGACGTCTTCCACGAGCTGCAGGACCGTTTCGGCCAGTACTTCGAGGCCCACATGGGCGCGGAGTCGATCAAGCGTCGCCTGGAGACCTTCGACCTGGCCGCCGAGTCCGAGAGCCTGCACCTGCAGATCTCCGAGGGCAAGGGTCAGCGCAAGATCCGCGCGATCAAGCGTCTGAAGGTCGTCAACTCGTTCCTGCAGACCGGCATGTCGCCGGCCTCGATGGTGCTCGACGTCGTTCCGGTGATCCCGCCGGAGCTGCGCCCGATGGTCCAGCTCGACGGTGGCCGTTTCGCCACCTCCGACCTGAACGACCTGTACCGTCGCGTGATCAACCGCAACAACCGCCTCCGTCGCCTGATCGACCTCGGTGCCCCCGAGATCATCGTCAACAACGAGAAGCGCATGCTGCAGGAGGCCGTCGACGCGCTGTTCGACAACGGCCGCCGCGGTCGTCCCGTCACCGGCACCGGCAACCGCGCCCTGAAGTCCCTGAGCGACATGCTCAAGGGAAAGCAGGGTCGTTTCCGCCAGAACCTGCTCGGCAAGCGCGTGGACTACTCGGGGCGTTCGGTCATCATCGTCGGACCCCAGCTGAAGCTGCACCAGTGCGGTCTGCCCAAGCAGATGGCGCTCGAGCTGTTCAAGCCGTTCGTGATCAAGCGTCTGATCGACCTCGGTCACTCGCAGAACATCAAGGCCGCCAAGCGTGCCGTCGAGCGCTACCGTCCCGAGGTCTGGGACGTGCTGGAAGAGATCATCCGCGAGCGTCCCGTGCTGCTGAACCGTGCACCCACCCTGCACCGTCTCGGCATCCAGGCGTTCGAGCCCCAGCTCGTCGAGGGCAAGGCGATCCAGCTGCACCCGCTCGTCTGCGCGGCGTTCAACGCCGACTTCGACGGTGACCAGATGGCCGTCCACCTGCCGCTGTCGGTCGAGGCCCAGGCCGAGGCCCGCGTCCTGATGCTCGCGTCGAACAACATCCTGAAGCCGTCCGACGGTCGCCCGGTGACCCTGCCCTCGCAGGACATGATCATCGGCCTGCACCACCTCACCACCCTCAAGGAGGGTGCCGTGGGCGAGGGCCGCGCGTTCGGTTCGGTGGGCGAGGCGATCCTGGCCAAGGACGAGGGCACCCTCGACCTGCAGGCCAAGGCGCGCATCCGCATCCCCGGCCTCACGTTCCTCGAGGGCCAGGCTCCCGAGGGCTACGAGAAGCACGGTCTCGTGGATGCCTCGCTCGGTCAGGCGATCTTCAACGACACGCTGCCCAAGGGCTACCCGTTCGTCCGCGAGCAGGCCGACAAGGGCAAGCTGTCGCAGATCGTCAACAAGCTGGCCGAGGAGTACCCCAAGGTCGAGGTCGCGGCATCGCTCGACCGGATCAAGGACGCCGGTTTCTACTGGGCCACGCGTTCGGGTGTGACGGTCGCGCTGAGCGACATCCTCACGCCCCCGAACAAGGGCGAGATCGTCGCGGGCTACGAGAAGCAGGCCGCAAAGGTCCAGGCGCAGTACGAGAAGGGTCTCACCACCGACGCCGAGCGTCGCCAGGAGCTCATCAAGATCTGGACCGAGGCCACGGATGCCGTCCAGAAGGCGATGCGCGACAACTTCCCGGCCGACAACACCATCAACCGCATGGTCTCGTCGGGTGCCCGTGGTAACTGGCTGCAGATCCGCAACATCGCGGGTATGCGAGGCCTGGTGAACAACCCCAAGGGTGAGATCATCCCGCGCCCGATCATCTCCTCGTACCGCGAGGGACTGTCGGTCGCCGAGTACTTCATCGCGACGCACGGTGCCCGTAAGGGTCTGGCCGACACGGCTCTCCGTACGGCCGACTCGGGGTACCTGACGCGTCGTCTGGTGGACGTCTCGCAGGACGTCATCATCCGCGAGGAGGACTGCGGCACGTCGAAGGGCCTCGAGCTCCCGATCGCCGCGGTCGACTCGACCGGCACCCTGGTCAAGGACGCCAACGTCGAGAACTCGGTCTTCGCCCGTACGCTCGCCACGGCGGTCGTCGACGCGCAGGGCACGGTTCTGGCGGAGGCCGGCGACGACGTGGGCGACGTGCTCATCGACAAGCTGGTCGCCGGTGGCGTCGAGACCATCAAGGTCCGCTCGGTCCTCACGTGCGACTCGGCCGTCGGTGTCTGCGCGAAGTGCTACGGCCGTTCGCTGGCCACCGGAAAGATCGTCGACATCGGCGAGGCCGTCGGCATCATCGCGGCCCAGTCGATCGGTGAGCCCGGTACCCAGCTGACGATGCGTACCTTCCACACGGGTGGTTCCGCGTCGGCCGACGACATCACGCAGGGTCTTCCCCGCGTGCAGGAGCTGTTCGAGGCGCGTACCCCCAAGGGTGCCTCGCCGATCGCGGAGGCCGACGGCCGCATCACGATCGACGAGACCGAGAAGGCCAAGAAGGTCATCCTCACGCCCGACAACGGTGACGAGCCGGTCGTCTACCCGGTCCTGAAGCGCGCGACCCTCCTCGTCGAGGACGGTCAGCACGTCAAGGTCGGCGAGCCCCTCCAGGTCGGAACGCTCGACCCCAAGGAGGTCATGCGCGTGCAGGGCGCCCGCGAGGTGCAGAAGTACCTCGTGAACGGCGTCCAGGGCGTGTACCGCTCGCAGGGTGTGCCGATCCACGACAAGCACATCGAGGTCATCGTGCGTCAGATGCTGCGCAAGGTCACGGTCGTCGACCACGGTGACACCGACCTGCTGCCCGGTGAGCTGGTGGACTTCAAGCGCTACCAGACCATCAACCGCGAGACGGTCGGCGAGGGCAAGCGCCCCGCGTCGGGTCGTCCCGAGCTGATGGGTATCACCAAGGCGTCGCTCGCGACCGAGTCGTGGCTGTCGGCGGCATCGTTCCAGGAGACCACCCGCGTCCTGACGCAGGCGGCCATGGAGGGCAAGAGCGACCCGCTCGTCGGCCTCAAGGAGAACGTCATCATCGGAAAGCTCATCCCCGCCGGAACCGGACTTGCGAAGTACCGCAACGTCACGGTCGAGGCGACGGAGGAGGCCAAGAGCGAGCGGTACCCCAACCGCATCTTCGCCTCGGACGGCGCGTACAGCGACGCCGACCTGAGCTACGTCGATTTCGACAGTTTCTCGACGGACGACTTCACGCCCGGCACCTACAACTGA
PROTEIN sequence
Length: 1292
VLESTTFDQLRIGLATADDIRRWSFGEVKKPETINYRTLKPEKDGLFGEQIFGPSRDWECACGKYKRVRFKGIVCERCGVEVTKSSVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDMAPKDLEKVIYFAAYMVISVDEDARHRDLATQENNIRLELKTLGDRRDSRIAARLAKLEEELAALEAEGAKADQKKKVKDAAEKDMTSIRKNADEQIAKLERVWEDFRTLEVGALKPEDDVFHELQDRFGQYFEAHMGAESIKRRLETFDLAAESESLHLQISEGKGQRKIRAIKRLKVVNSFLQTGMSPASMVLDVVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLRRLIDLGAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGTGNRALKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLHQCGLPKQMALELFKPFVIKRLIDLGHSQNIKAAKRAVERYRPEVWDVLEEIIRERPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCAAFNADFDGDQMAVHLPLSVEAQAEARVLMLASNNILKPSDGRPVTLPSQDMIIGLHHLTTLKEGAVGEGRAFGSVGEAILAKDEGTLDLQAKARIRIPGLTFLEGQAPEGYEKHGLVDASLGQAIFNDTLPKGYPFVREQADKGKLSQIVNKLAEEYPKVEVAASLDRIKDAGFYWATRSGVTVALSDILTPPNKGEIVAGYEKQAAKVQAQYEKGLTTDAERRQELIKIWTEATDAVQKAMRDNFPADNTINRMVSSGARGNWLQIRNIAGMRGLVNNPKGEIIPRPIISSYREGLSVAEYFIATHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTSKGLELPIAAVDSTGTLVKDANVENSVFARTLATAVVDAQGTVLAEAGDDVGDVLIDKLVAGGVETIKVRSVLTCDSAVGVCAKCYGRSLATGKIVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGSASADDITQGLPRVQELFEARTPKGASPIAEADGRITIDETEKAKKVILTPDNGDEPVVYPVLKRATLLVEDGQHVKVGEPLQVGTLDPKEVMRVQGAREVQKYLVNGVQGVYRSQGVPIHDKHIEVIVRQMLRKVTVVDHGDTDLLPGELVDFKRYQTINRETVGEGKRPASGRPELMGITKASLATESWLSAASFQETTRVLTQAAMEGKSDPLVGLKENVIIGKLIPAGTGLAKYRNVTVEATEEAKSERYPNRIFASDGAYSDADLSYVDFDSFSTDDFTPGTYN*