ggKbase home page

scnpilot_p_inoc_scaffold_117_curated_73

Organism: scnpilot_dereplicated_Microbacterium_4

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(65278..66201)

Top 3 Functional Annotations

Value Algorithm Source
rlu; pseudouridylate synthase, 23S RNA-specific; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] similarity KEGG
DB: KEGG
  • Identity: 89.6
  • Coverage: 307.0
  • Bit_score: 579
  • Evalue 6.40e-163
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.6
  • Coverage: 307.0
  • Bit_score: 579
  • Evalue 2.90e-162
RNA pseudouridine synthase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003469449 similarity UNIREF
DB: UNIREF100
  • Identity: 95.4
  • Coverage: 307.0
  • Bit_score: 609
  • Evalue 1.40e-171

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium testaceum → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 924
ATGGATTCGCGGAGTCTTCCCGTCCCGGACGGGCTCGAAGGGACGCGCGTCGACCAGGCCCTGGCCAAGATGCTGGGGTTCTCGCGGACGTTCGCGGCCGAGGTCGCCGACGCGGGCGGGGTGAGTGTCGACGGGCGCACGGTCGGTCGATCCGATCGTCTGCGCGCCGGTACGTGGCTGAGCGTCGAGTGGGAGCCCAGGCGCGATCCGGAAGTCGTGCCCGTCGCCGTCCCCGACCTCGGCATCGTGTGGGACGACGACGACATCGTCGTCGTCGACAAGCCGTCCGGCGTCGCGGCGCACCCCTCCGTCGGCTGGGACGGCCCCACGGTTCTCGGCGCCCTCGCCGCCGCGGGATTCCGGATCGCCACCAGCGGTGCCGCGGAGCGTCGCGGCATCGTGCACCGTCTCGATGTGGGCACGAGCGGCCTCATGGTCGTCGCGAAGACCGAGCGCGCGTACACGGTGCTGAAGGCCGCGTTCAAGGACCGCACGGTCGACAAGATCTATCACGCCGTGGTCCAGGGGCATCCCGATCCGCTGGCCGGCACGATCGACGCGCCGATCGGTCGGCATCCCCACCACTCGTGGAAGTTCGCCGTCACGCCCGACGGCAAGGACTCCGTGACGCACTACGAGACGCTCGAGGCGTTCCCCCGGGCCTCTCTCCTCGAGATCCACCTCGAGACCGGCCGCACGCACCAGATCCGCGTCCACATGGCGGCCCACCGGCACCCGTGCGCGGGCGACCCGCTGTACGGCGCCGACCCCACGCTGTCAGCCCGGCTCGGCCTCACACGCCAGTGGCTGCACGCCCACCGGCTCGCCTTCACCCACCCGGCGACGGGGGAATGGGTGAGCTTCGAGTCGTCCTACCCGACCGATCTGCAGCACGCACTCGACGTGCTGCGCGACGGCGTCTGA
PROTEIN sequence
Length: 308
MDSRSLPVPDGLEGTRVDQALAKMLGFSRTFAAEVADAGGVSVDGRTVGRSDRLRAGTWLSVEWEPRRDPEVVPVAVPDLGIVWDDDDIVVVDKPSGVAAHPSVGWDGPTVLGALAAAGFRIATSGAAERRGIVHRLDVGTSGLMVVAKTERAYTVLKAAFKDRTVDKIYHAVVQGHPDPLAGTIDAPIGRHPHHSWKFAVTPDGKDSVTHYETLEAFPRASLLEIHLETGRTHQIRVHMAAHRHPCAGDPLYGADPTLSARLGLTRQWLHAHRLAFTHPATGEWVSFESSYPTDLQHALDVLRDGV*