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scnpilot_p_inoc_scaffold_117_curated_94

Organism: scnpilot_dereplicated_Microbacterium_4

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 85611..86600

Top 3 Functional Annotations

Value Algorithm Source
peptidoglycan-binding protein LysM n=1 Tax=Microbacterium sp. B19 RepID=UPI00034CB1BB similarity UNIREF
DB: UNIREF100
  • Identity: 80.1
  • Coverage: 332.0
  • Bit_score: 521
  • Evalue 5.40e-145
LysM repeat similarity KEGG
DB: KEGG
  • Identity: 72.4
  • Coverage: 337.0
  • Bit_score: 463
  • Evalue 5.50e-128
FOG: LysM repeat {ECO:0000313|EMBL:BAJ73079.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.4
  • Coverage: 337.0
  • Bit_score: 463
  • Evalue 2.40e-127

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Taxonomy

Microbacterium testaceum → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 990
ATGCGACGACTCCCTCCCCTGTCCGCGCGCCCGCGGAGCCGCACGATCTGGCCCGCGGCCGTGGCCGGCACGATCGCCCTCGCCCTCTCCGGCGAGAACGCCGCGCACGCCGCCCCACCGGCGCCCACCCTCTCCCCCGTGCCTCCCGCGCCGCGGACGCTCGGTGCGCCGGTCCTCGCCAGCGCGACTCCGGTGTCGTACACCGTTCAGCCCGGCGACACGGTCTGGGCGATCGCCCGCGCGCACGGGCTGGACACCGCCGGCGTCCTCGCCGCGAACGGCCTCGACGCGAGCAGCATCATCCGGCCCGGACAGGTCCTCGCGCTCGTGCCCGCCCCCGTGGCCCCCGCATCCACGGAGGAGGCCACCGTCGCCCCCGCACCGAGCGGACGGACCCACGAGGTGCGGCCCGGCGACACCGTCTCGGCGATCGCCTCGGCAGGCGGCGTCTCCACCGACGCCGTCCTCGCCGCGAACGGCCTCACCCGCGCGTCGATCATCTACCCCGGCGAGATCCTGCAGATCCCTTCGGGCGCCGTACCCGTCGAGGTCGTGGCATCCACCGGTCCGGTGACGGCCCCCGGTCTCGACGGCGAGCAGTCGGAGAACGCCCGGCTCATCATCCGCATCGGTCGGGAGTCGGGCGTCTCGGACCGCGGCATCGCGATCGCCCTCGGCACCGCCATGCAGGAGTCGTGGCTGCGGAACCTCGATTGGGGGGACCGCGACTCCCTCGGCCTCTTCCAGCAGCGGCCGAGCACCGGATGGGGCACGCCGGAACAGATCCTCGACCGCGAACGGGCGACGCGCGTGTTCTACGGCGGGACCGCCGACCCCAACGGCACCGCGACGCGCGGCCTCCTGGACATCCCGGGCTGGGAGGGCATGGCGTACGCCGACGCCGCCCAGGCCGTGCAGATCTCGGCCTACCCCGATCGCTACGCGCAGTGGGAGTCCCCCGCGACCGCCTGGATCTCCGTTCTCGGCTGA
PROTEIN sequence
Length: 330
MRRLPPLSARPRSRTIWPAAVAGTIALALSGENAAHAAPPAPTLSPVPPAPRTLGAPVLASATPVSYTVQPGDTVWAIARAHGLDTAGVLAANGLDASSIIRPGQVLALVPAPVAPASTEEATVAPAPSGRTHEVRPGDTVSAIASAGGVSTDAVLAANGLTRASIIYPGEILQIPSGAVPVEVVASTGPVTAPGLDGEQSENARLIIRIGRESGVSDRGIAIALGTAMQESWLRNLDWGDRDSLGLFQQRPSTGWGTPEQILDRERATRVFYGGTADPNGTATRGLLDIPGWEGMAYADAAQAVQISAYPDRYAQWESPATAWISVLG*