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scnpilot_p_inoc_scaffold_117_curated_150

Organism: scnpilot_dereplicated_Microbacterium_4

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(150761..151573)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase {ECO:0000313|EMBL:KHK99945.1}; EC=1.1.1.25 {ECO:0000313|EMBL:KHK99945.1};; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.5
  • Coverage: 270.0
  • Bit_score: 413
  • Evalue 2.40e-112
putative shikimate 5-dehydrogenase; K00014 shikimate dehydrogenase [EC:1.1.1.25] similarity KEGG
DB: KEGG
  • Identity: 72.9
  • Coverage: 269.0
  • Bit_score: 374
  • Evalue 3.60e-101
Putative shikimate dehydrogenase n=1 Tax=Gordonia rhizosphera NBRC 16068 RepID=K6VU96_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 78.5
  • Coverage: 270.0
  • Bit_score: 404
  • Evalue 7.90e-110

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Taxonomy

Microbacterium mangrovi → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 813
ATGCCCGAACTGAGCAAGGACACCACCGTCTGCATCTCCCTGGCCGGCCGTCCCTCGAACATCGGAACCCGCTTCCACAACTTCCTCTACGCCGAACTCGGGCTCGATTTCCTCTACAAGGCGTTCACGACGACCGATATCGCCGGAGCGATCGCCGGGGTCCGCGCGCTCGGCATCCGCGGCTGTTCGGTGTCGATGCCCTTCAAAGAGGCGGTGATCCCCCTGGTCGACCACATCGAACACTCGGCGGCGGCGATCGGGTCGGTCAACACGATCGTGAACGACGGGGGAGAGCTCACGGCTTCGAACACCGACTACGAGGCGATCGCGAGTCTGATCGAGAGCCACCGCCTCGACCCCGCGGCATCCGTCCTCGTGCGGGGGTCGGGCGGCATGGCCAAGGCCGTGGTGGCGGCCTTCCACGGCGCGGGATTCCGCGACCTCACGGTCGTCGCCCGCAACGCCGAGGCGGGCCCCGCGCTCGCCGCGACGTACGGCTTCCGCTGGGTCCCCGAGGATCCGCCGCCCGGCGGCGACATCGTCGTCAACGTCACACCGCTCGGCATGAACGGAACGGATGCCGGTGCCCTGGCGTTCTCCCCGGAGCACATCGCCGCGGCGACCACCGTGTTCGACGTCGTCGCCTTCCCCGCCGAGACCCCGCTCATCCGCGCGGCGCGGGAGGCCGGACGGGACGTCATCACGGGCGCCGAGGTGATCGCCCTGCAGGCGGCCGGCCAGTTCGCGCGATACACCGGCGTGACCCCCACCCCCGATCAGGTGGCGAGGGCGTCCGCGCACTCGCGCGCGTGA
PROTEIN sequence
Length: 271
MPELSKDTTVCISLAGRPSNIGTRFHNFLYAELGLDFLYKAFTTTDIAGAIAGVRALGIRGCSVSMPFKEAVIPLVDHIEHSAAAIGSVNTIVNDGGELTASNTDYEAIASLIESHRLDPAASVLVRGSGGMAKAVVAAFHGAGFRDLTVVARNAEAGPALAATYGFRWVPEDPPPGGDIVVNVTPLGMNGTDAGALAFSPEHIAAATTVFDVVAFPAETPLIRAAREAGRDVITGAEVIALQAAGQFARYTGVTPTPDQVARASAHSRA*