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scnpilot_p_inoc_scaffold_117_curated_232

Organism: scnpilot_dereplicated_Microbacterium_4

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(214344..215273)

Top 3 Functional Annotations

Value Algorithm Source
tyrosine recombinase XerD n=1 Tax=Microbacterium sp. B19 RepID=UPI00034DBC24 similarity UNIREF
DB: UNIREF100
  • Identity: 94.5
  • Coverage: 309.0
  • Bit_score: 570
  • Evalue 9.50e-160
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.0
  • Coverage: 309.0
  • Bit_score: 536
  • Evalue 2.80e-149
xerD; site-specific recombinase XerD; K04763 integrase/recombinase XerD similarity KEGG
DB: KEGG
  • Identity: 88.3
  • Coverage: 309.0
  • Bit_score: 535
  • Evalue 1.10e-149

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Taxonomy

Microbacterium sp. SUBG005 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 930
GTGGAGCTCGAGCGGGCGGTCGAGACGTACCTCCGACACGTCGCGCTCGAGCGGGGCCTGTCGGACCACACCGTCGCCGCGTACCGCCGCGACCTGGCGGTCTACACGACATGGCTGGTGGCGCGGGGCGTCGTTGACACGGCTGCCGTGACCCCGGCGATGGTCGCCGAGTTCGCGGCCGAACGGGCGTCGACGGAACCGCCTCCCGCGGCCTCGTCCCTGGCCCGGCTGCAGTCATCGGTGCGGGGTCTGCATCGCTTCCTCGTGCGTGAGGGACGTGCGGAAGACGATCCGAGCGGAAGGCTCCGCCCTCCGAAGGCCCCGCGTCGGCTGCCCAAGGCGCTGTCGATCGCGCAGGTCGAGCAGTTGCTGGATGCCGCGGGCCCCGCGCCGGGGTCGGCGGACGCGACCGCGGCGGATCCGTCGGCCGTCCGCGACCGTGCTCTGCTCGAGCTGTTGTACGCGACGGGCGCGCGCGTGTCGGAGATCGTGCAGCTCGACGTGGACGACACCGCGCACGGCGACGTGCTGCGCGTGCGCGGCAAGGGCGCGAAGGAGCGGATCGTCCCGGTCGGCTCCTACGCCCGCGCCGCCGTGGAGGCGTACCTCACGCGCGTCCGCCCCGCGTGGGCGGCGAAGGGACGGGCCACTCCGCGGCTGTTCCTCGGGGTCCGCGGGGCGCCGCTGTCGCGACAGAGTGCGTGGCTCATCATCCAGGCCGCCGCCGAGCGGGCGGGGCTCACGGCGCACGTCTCGCCCCACACCCTCCGTCACTCGTTCGCGACGCATCTGCTGCAGGGCGGCGCCGACGTGCGCGTGGTGCAGGAACTCCTCGGGCACGCCTCCGTCGCCACGACGCAGATCTACACGCACGTCTCGGTCGACGCCCTCCGCGACGTCTACGCGACGGCCCACCCGCGGGCGCGGTGA
PROTEIN sequence
Length: 310
VELERAVETYLRHVALERGLSDHTVAAYRRDLAVYTTWLVARGVVDTAAVTPAMVAEFAAERASTEPPPAASSLARLQSSVRGLHRFLVREGRAEDDPSGRLRPPKAPRRLPKALSIAQVEQLLDAAGPAPGSADATAADPSAVRDRALLELLYATGARVSEIVQLDVDDTAHGDVLRVRGKGAKERIVPVGSYARAAVEAYLTRVRPAWAAKGRATPRLFLGVRGAPLSRQSAWLIIQAAAERAGLTAHVSPHTLRHSFATHLLQGGADVRVVQELLGHASVATTQIYTHVSVDALRDVYATAHPRAR*