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scnpilot_p_inoc_scaffold_120_curated_13

Organism: scnpilot_dereplicated_Microbacterium_4

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 10310..10837

Top 3 Functional Annotations

Value Algorithm Source
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Lipoprotein signal peptidase; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=33014 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. insidiosus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.0
  • Coverage: 160.0
  • Bit_score: 156
  • Evalue 3.40e-35
lspA; hypothetical protein (EC:3.4.23.36) similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 160.0
  • Bit_score: 155
  • Evalue 2.20e-35
Lipoprotein signal peptidase n=1 Tax=Clavibacter michiganensis subsp. nebraskensis NCPPB 2581 RepID=M5BBN4_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 160.0
  • Bit_score: 155
  • Evalue 7.10e-35

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Taxonomy

Clavibacter michiganensis → Clavibacter → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 528
GTGAGCAGATTCACACGCCTCCTCGCTGCCGCTGCTGCCGTAGTTGCCGCCTTCACGGTCGACCAACTCACCAAAGCGTGGGCCCTGTCCTACCTCGACGGAGGCCGTGATATCGACCTTGGGCTGGGCGTATCCCTGCGCCTCGTGTTCAACCCTGGGGTCGCATTCGGTCTCGGCGGCGATGTAGGAGCGCCGCTTGTCGTCGGCGTTATGGTCCTTGTCGCCGCGCTGCTCACGTGGATCGTCATCCGAGTGCTGCGGAGGCAGAGCATGGGCGCTACTGCGCTGCTGGCTGCCGCCGCCGGCGGCGCGATCGGCAACCTGTGGGACCGCACCACACGCGCTGAAACCGGACCGCTCAGCGGAGAGGTCGTCGACTTCATCGCTGTCGACTGGTTCGCCATCTTCAACGTGGCTGACATCTTCACAACCCTCGGCCTGCTCGGGTGGGCAGCCTTGTATCTGCTCCGTCGAGACCACGCTCCCATCAGCGGGAGCACCGGTGACGGTTCCCAGCACCGCGGCTGA
PROTEIN sequence
Length: 176
VSRFTRLLAAAAAVVAAFTVDQLTKAWALSYLDGGRDIDLGLGVSLRLVFNPGVAFGLGGDVGAPLVVGVMVLVAALLTWIVIRVLRRQSMGATALLAAAAGGAIGNLWDRTTRAETGPLSGEVVDFIAVDWFAIFNVADIFTTLGLLGWAALYLLRRDHAPISGSTGDGSQHRG*