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scnpilot_p_inoc_scaffold_120_curated_92

Organism: scnpilot_dereplicated_Microbacterium_4

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 87245..88483

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-24 n=1 Tax=Microbacterium sp. B19 RepID=UPI00034C258F similarity UNIREF
DB: UNIREF100
  • Identity: 96.6
  • Coverage: 407.0
  • Bit_score: 763
  • Evalue 1.30e-217
RNA polymerase sigma factor containing a TPR repeat domain similarity KEGG
DB: KEGG
  • Identity: 82.3
  • Coverage: 412.0
  • Bit_score: 660
  • Evalue 2.90e-187
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.3
  • Coverage: 412.0
  • Bit_score: 660
  • Evalue 1.30e-186

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Taxonomy

Microbacterium testaceum → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1239
GTGACCCCCGACCCCGAGGTCGCGCGCCGCGTCGCGGCGATCTGGCGCATCGAGGGCGCCCGGATCGTCGCGGCGCTGGCCCGCGTGGTCGGCGACCTCGGCACCGCGGAGGACCTCGCGCAGGACGCGCTCGTCGAGGCCGTGGAGCAGTGGGGGCGCGACGGCGTCCCCCGGAACCCCGGGGCGTGGCTGACGGCGGTGGCGAAGCGGCGCGCGATCGACGGCTGGCGGCGCGAGCAACGCCTCGGCGAGAAGTACCGGCTCCTCGCCGCCGACCTCGACGAGGTGGCCGACGACGTGTGGGAGCCCATCGACGACGACGTGCTGCGTCTCGTGTTCGCCGCCTGTCACCCGGTGCTCTCGCGCGAGGCGCAGGTGGCGTTGACGCTGAAGGTCGTGGCCGGCCTCGACACGGAGGCGATCGCGCGCCTCTTCCTCGTGCCGGTTCCGACGATGCAGCAGCGGATCGTCCGGGCGAAGAAGGCGCTCAGCGCCGCCCGCGCGCCCTTCGCGGTGCCCGAACCGGCGGAGTGGCCGGCGCGGCGCACCGCGGTGCTCACGGTCGTGTACCTGATCTTCACCGAGGGCTACGTCGCGAGCACCGGTGACGCGGTGCTCCGCACCGAGTTGGCGCACGAGGCGCTGCGGCTCGGTCGCGTCCTCGACCGGCTGCTCCCCCGCGAGCCGGAGGTGCTCGGGCTGTCCGCGCTCATGGAGTTCCAGGCATCCCGCTTCGCGGCCCGCGTCGACGGGAACGGGGATGCCGTGCTCCTGGCCGACCAGGACCGACGACGGTGGGACCGCTCGGCGATCGCCCGCGGGCGCGCGCTGCTCGACGGGGCCGATGCGCTGGGCAAGGGTCGCGGTCCCTATCAGCTGCAGGCGGCGATCGCGCTGTGTCACGCGGAGGCGGCGAGCGTCGACGAGACCGACTGGGACCGCATCGTCCTGCTGTACGAGATGCTCGGCCGGATCACCGCGAACCCGGTCGTCGAGCTCAATCGCGCGGTCGCCGTGTCGATGGCATCCGGCCCCGAGGAGGGGCTCGCGATCGTCGACGGGATGGATGCCACGCCCCTCCGCGGCTCGCATCTGCTGCCCTCGGTGCGCGGCGAACTGCTCGCGCGCCTGGGTCGCGTCGAGGATGCTCGCGCCGCGCTGCTCGAGGCCGCCGACCTCACCCGCAACGCCCGCGAGGCGGCACTGCTGCGGCGGAAGGCCGAGGCACTCCGCCGCTGA
PROTEIN sequence
Length: 413
VTPDPEVARRVAAIWRIEGARIVAALARVVGDLGTAEDLAQDALVEAVEQWGRDGVPRNPGAWLTAVAKRRAIDGWRREQRLGEKYRLLAADLDEVADDVWEPIDDDVLRLVFAACHPVLSREAQVALTLKVVAGLDTEAIARLFLVPVPTMQQRIVRAKKALSAARAPFAVPEPAEWPARRTAVLTVVYLIFTEGYVASTGDAVLRTELAHEALRLGRVLDRLLPREPEVLGLSALMEFQASRFAARVDGNGDAVLLADQDRRRWDRSAIARGRALLDGADALGKGRGPYQLQAAIALCHAEAASVDETDWDRIVLLYEMLGRITANPVVELNRAVAVSMASGPEEGLAIVDGMDATPLRGSHLLPSVRGELLARLGRVEDARAALLEAADLTRNAREAALLRRKAEALRR*