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scnpilot_p_inoc_scaffold_120_curated_119

Organism: scnpilot_dereplicated_Microbacterium_4

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(117546..119330)

Top 3 Functional Annotations

Value Algorithm Source
deaD; superfamily II DNA and RNA helicase; K05592 ATP-dependent RNA helicase DeaD [EC:3.6.4.13] similarity KEGG
DB: KEGG
  • Identity: 93.9
  • Coverage: 588.0
  • Bit_score: 1058
  • Evalue 0.0
ATP-dependent RNA helicase DeaD {ECO:0000256|HAMAP-Rule:MF_00964}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00964};; Cold-shock DEAD box protein A {ECO:0000256|HAMAP-Rule:MF_00964}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.9
  • Coverage: 588.0
  • Bit_score: 1058
  • Evalue 0.0
cold-shock protein, partial n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B5A4B1 similarity UNIREF
DB: UNIREF100
  • Identity: 97.8
  • Coverage: 580.0
  • Bit_score: 1080
  • Evalue 0.0

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Taxonomy

Microbacterium testaceum → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1785
GTGGCGGACTACCGTGGAGTCATGGCATCCGAAAACCCCGTCCCCTCCGCAGAGGCGGACACCGCCCCCGAGCAGCTCACCTTCGCCGACCTGGGACTGGATGCCGCTGTGCTCAAGGCCCTCAAGGACGTCGGCTACGAGACCCCGTCGGCCATCCAGGCCGCCACGATCCCCGTCCTCCTGCAGGGCCGCGACGTGGTCGGCCTCGCCCAGACCGGCACGGGGAAGACCGCCGCGTTCGCTCTGCCGGTGCTGTCGCAGATGGAGACCGGCCACAAGAATCCGCAGGCCCTCGTGCTGGCCCCGACCCGCGAACTCGCCCTGCAGGTGTGCGAGGCGTTCGAGAAGTACGCCGCGCACATCAAGGGCGTCTCGGTGCTGCCGGTCTACGGCGGCCAGGGCTACGGCCAGCAGCTGTCGGCGCTGCGCCGCGGCGTCGACATCGTCGTGGGCACGCCCGGTCGCATCATGGACCACCTCGACAAGGGCACGCTCGACCTCAGCGAGCTGAAGTACCTCGTGCTCGACGAGGCCGACGAGATGCTGAAGATGGGCTTCGCGGAGGACGTCGAGACGATCCTCGCCGACACCCCGTCCACCAAGCAGGTCGCGCTGTTCTCGGCGACGATGCCCGCGCAGATCCGCCGGATCTCGGCGCAGTACCTCAACGACCCCGAAGAGATCACGGTCAAGACCAAGACCACTACCTCCGCGAACATCACCCAGCGGTACCTCGTGGTGTCGTACCAGCAGAAGATCGATGCGCTCACCCGCATCCTCGAGGTCGAGAACTTCGAGGGCATGATCGTCTTCACCCGCACGAAGAACGAGACCGAGACCGTCGCCGAGAAGCTGCGCGCCCGCGGCTACACGGCCGCCGCGATCAACGGCGACGTCGCGCAGGTGCAGCGCGAGCGCACGGTCAACCAGCTGAAGTCCGGCAAGCTCGACATCCTCGTCGCCACCGACGTGGCCGCCCGCGGTCTCGACGTCGAGCGCATCAGCCACGTCGTCAACTACGACCTGCCGATCGACACCGAGTCGTACGTGCACCGCATCGGCCGTACCGGCCGCGCGGGGCGGACCGGGGATGCCATCAGCTTCGTGACCCCGCGCGAGCGCCGCATGCTCACCGCGATCGAGAAGGCGACCCGCCAGCCGCTGACCGAGATGTCGCTGCCCAGCGTCGACGACGTCAACGCCACGCGCCTGACCCGCTTCGACGACGCGATCACCGCCGCGCTCGAGGACACCGCCGCGATCGCGACGTTCCGCGATGTCGTCGCCCACTACGTCGCCCACCACGACGTGCCCGAGGCCGACGTCGCCGCGGCGCTCGCCGTGGTCGCGCAGGGTGACACGCCCCTCCTGATGGAGGAGGAGACGATCTCGCAGCCGCGCTTCGACCGTGACCGTTCGGACCGCGACCGTGCGCCGCGCGACGGCGACCGCGGAGACCGCGGCGACCGCGGCGACCGGCGCAGCAGCGACGGCCGCTTCGCGACGTACCGCATCGCGGTGGGACGTCGGCAGCGGGTCGAGCCGCGGCAGATCGTCGGGGCGCTCGCGAACGAGGGGGGCCTCCGCCGCAACGACTTCGGGGCGATCCAAATCCGCCAGGACTTCTCGCTCGTCGAGCTCCCGGCCGACCTGTCGCGCGACACCCTCAACCGGCTCACGGACACCCGCATCTCTGGTGTCCTCATCGACCTGCGCCTGGACCAGGGCGGCCGTTCCGCGAAGCGCACCGAGCGCCCGCAGCGACGCTCGTACGACCGGGACTGA
PROTEIN sequence
Length: 595
VADYRGVMASENPVPSAEADTAPEQLTFADLGLDAAVLKALKDVGYETPSAIQAATIPVLLQGRDVVGLAQTGTGKTAAFALPVLSQMETGHKNPQALVLAPTRELALQVCEAFEKYAAHIKGVSVLPVYGGQGYGQQLSALRRGVDIVVGTPGRIMDHLDKGTLDLSELKYLVLDEADEMLKMGFAEDVETILADTPSTKQVALFSATMPAQIRRISAQYLNDPEEITVKTKTTTSANITQRYLVVSYQQKIDALTRILEVENFEGMIVFTRTKNETETVAEKLRARGYTAAAINGDVAQVQRERTVNQLKSGKLDILVATDVAARGLDVERISHVVNYDLPIDTESYVHRIGRTGRAGRTGDAISFVTPRERRMLTAIEKATRQPLTEMSLPSVDDVNATRLTRFDDAITAALEDTAAIATFRDVVAHYVAHHDVPEADVAAALAVVAQGDTPLLMEEETISQPRFDRDRSDRDRAPRDGDRGDRGDRGDRRSSDGRFATYRIAVGRRQRVEPRQIVGALANEGGLRRNDFGAIQIRQDFSLVELPADLSRDTLNRLTDTRISGVLIDLRLDQGGRSAKRTERPQRRSYDRD*