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scnpilot_p_inoc_scaffold_120_curated_232

Organism: scnpilot_dereplicated_Microbacterium_4

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(242473..242643)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, XRE family n=1 Tax=Frankia sp. EUN1f RepID=D3DAQ1_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 80.0
  • Coverage: 55.0
  • Bit_score: 88
  • Evalue 2.60e-15
Transcriptional regulator, XRE family {ECO:0000313|EMBL:EFC80012.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.0
  • Coverage: 55.0
  • Bit_score: 88
  • Evalue 3.70e-15
ficR; HTH3 DNA-binding transcription regulator similarity KEGG
DB: KEGG
  • Identity: 60.7
  • Coverage: 56.0
  • Bit_score: 71
  • Evalue 8.00e-11

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Taxonomy

Frankia sp. EUN1f → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 171
ATGAACAGTCGGGAGTTCGCGCGCCTGTGGGCCAAGCACGACGTGCGGTTGTGTTCGACCGGAACGAAGCGGTTGCACCACCCGAAGGTGGGCGACCTCGACCTGAATTACGAGGTGCTGCACCTTCCCGACAGCCAGCGCACGCCGACCGCCCATCGTGACCACAACTAG
PROTEIN sequence
Length: 57
MNSREFARLWAKHDVRLCSTGTKRLHHPKVGDLDLNYEVLHLPDSQRTPTAHRDHN*