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scnpilot_p_inoc_scaffold_546_curated

Search features with annotation key words

Displaying items 31-47 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_546_curated_31
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(43466..45100)
DNA (1635bp) protein (545aa)
TonB family protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8B3_PALPW
tonb family protein
TonB family protein {ECO:0000313|EMBL:ADQ80957.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_546_curated_32
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(45097..45453)
DNA (357bp) protein (119aa)
Transcriptional regulator n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8B4_PALPW
transcriptional regulator; K07737 putative transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ADQ80958.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_546_curated_33
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(45761..47041)
DNA (1281bp) protein (427aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Enolase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3A2_PALPW
scnpilot_p_inoc_scaffold_546_curated_34
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(47167..47475)
DNA (309bp) protein (103aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0S0_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ78195.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_546_curated_35
Cyclobacterium qasimii, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(47478..49643)
DNA (2166bp) protein (722aa)
Na+/H+ antiporter n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7WS02_9BACT
Na+/H+ antiporter {ECO:0000313|EMBL:EPR66883.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-11B.;"
transporter, cpa2 family
scnpilot_p_inoc_scaffold_546_curated_36
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

49659..51143
DNA (1485bp) protein (495aa)
alpha-L-fucosidase; K01206 alpha-L-fucosidase [EC:3.2.1.51]
Alpha-L-fucosidase n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B8B7_RUMGN
Tax=RBG_13_Acidobacteria_68_16_curated
scnpilot_p_inoc_scaffold_546_curated_37
GWA2_OP11_ACD38-rel_38_17, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(51180..52271)
DNA (1092bp) protein (364aa)
site-specific DNA-methyltransferase (adenine-specific) (EC:2.1.1.72)
K07318 adenine-specific DNA-methyltransferase n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7J1A5_PSEPS
Site-specific DNA-methyltransferase (Adenine-specific) {ECO:0000313|EMBL:KKQ59884.1}; TaxID=1618421 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_38_17.;"
scnpilot_p_inoc_scaffold_546_curated_38
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(52293..54761)
DNA (2469bp) protein (823aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Endonuclease MutS2 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3A4_PALPW
smr protein/muts2; K07456 DNA mismatch repair protein MutS2
scnpilot_p_inoc_scaffold_546_curated_39
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(54810..56366)
DNA (1557bp) protein (519aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J327_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGJ99871.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
xylE; D-xylose transporter XylE; K08138 MFS transporter, SP family, xylose:H+ symportor
scnpilot_p_inoc_scaffold_546_curated_40
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(56518..57837)
DNA (1320bp) protein (440aa)
D-xylose isomerase (EC:5.3.1.5)
Xylose isomerase id=4913096 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
scnpilot_p_inoc_scaffold_546_curated_41
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(57877..59361)
DNA (1485bp) protein (495aa)
carbohydrate kinase, fggy; K00854 xylulokinase [EC:2.7.1.17]
Carbohydrate kinase, FGGY n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2A8_PALPW
Carbohydrate kinase, FGGY {ECO:0000313|EMBL:ADQ78852.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_546_curated_42
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(59376..60089)
DNA (714bp) protein (238aa)
NUDIX hydrolase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2A9_PALPW
nudix hydrolase
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_546_curated_43
unknown

Not on your lists

60141..60356
DNA (216bp) protein (72aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_546_curated_44
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

60386..61804
DNA (1419bp) protein (473aa)
cytoplasmic peptidoglycan synthetase domain-containing protein; K01924 UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
Cytoplasmic peptidoglycan synthetase domain protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7R7_PALPW
Cytoplasmic peptidoglycan synthetase domain protein {ECO:0000313|EMBL:ADQ80761.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_546_curated_45
unknown

Not on your lists

62656..62940
DNA (285bp) protein (95aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_546_curated_46
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

62997..64076
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YQT9_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK63754.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
scnpilot_p_inoc_scaffold_546_curated_47
unknown

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64078..64137
DNA (60bp) protein (20aa)

This feature has no annotations

Displaying items 31-47 of 47 in total

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