ggKbase home page

scnpilot_p_inoc_scaffold_15362_curated_1

Organism: scnpilot_dereplicated_Paludibacter_1

near complete RP 51 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 3..1124

Top 3 Functional Annotations

Value Algorithm Source
RHS repeat-associated core domain protein (Fragment) n=3 Tax=Porphyromonas gingivalis JCVI SC001 RepID=T2N9Y8_PORGN similarity UNIREF
DB: UNIREF100
  • Identity: 47.8
  • Coverage: 228.0
  • Bit_score: 188
  • Evalue 9.40e-45
Uncharacterized protein {ECO:0000313|EMBL:ETA27630.1}; TaxID=1211023 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas gingivalis SJD2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.8
  • Coverage: 228.0
  • Bit_score: 188
  • Evalue 1.30e-44
yd repeat protein similarity KEGG
DB: KEGG
  • Identity: 37.0
  • Coverage: 230.0
  • Bit_score: 136
  • Evalue 1.30e-29

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Porphyromonas gingivalis → Porphyromonas → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1122
ACCGACCGCGGCTATACCGGGCACGAACACCTGACGCCTTTCGGCGACGACAGTAACAGCGGTTTCTGTCTTATCAATATGAACGGAAGGATTTACGACCCCGTACTGGCTCGTTTCCTCAGTCCCGACCCCTATGTGCAGGCTCCCGACTTTACGCAGAGCTTTAACAGATATGCCTATTGTTGGAATAATCCGTTGGTTTATACTGATCCGAGTGGGGAGTTTATTTTTACAGCTTTATTAACCCCTATTGGATTAACTGCATTAGGTGTTATTGTTGACGGTGCGTGTTGGGGTGCTGTGATTGGTGGTGCGACATATACCATATCTGCCGCTTTCAGTCAAGGTGGATTGAATAATTGGAATTTGAAAGATTTTGGTAATTCTATGCTTGTCGGTGCAGCTTCTGGGGCTGTATTTGCAGGAATGGGATTAATTGCACCTTCTTTTACGGTTTCTTCTACAAGTTTTGCAAGTAATTTACCTACTTATTTGGGAAAAGCAGGTTATGCAGCACTGACAGGTGGACTTTCTGCGGGTGCGGGAATGCTGACGGGTGATTATTTAGACGATAGCAAAATAAATACTCCTTTCAAAGATTATATGAAAGGTATGGGAATTGCTGCCGCTACGTCAGGGCTGATTTCCTTTGGTGGTTCTGTTTATGATTATGCCACTTGGGATAAATATACGCCTGCCCAAAAAGTTGCTCGATTACAACAGGAATTTGGCATTAGGATACAACACGATGCAACAAATACCACTGATTATGGTTATTTTGACCCCCAAACAAGCCAATCTAAATTGTTCATAACTGATAAAGGACTGCAAAGTCGCAGTATGGCGAGAAGTACCATTGCACACGAATTACAGCATTATAACGATTTTCAAAATTATGTTGTAGCGCCCATAAGAGCAGGAAATACCCCCTCAATGACAGGTAATGCGTATAGTAATTTTACAGAGAGAAATGCCTATTCATTAGAATTAAGAATGGCAAATAAATACGCTTTATCAATGAACGACTGGATGGTAAGTGCTGCGGGGGCAAAATACTACGGTGCTGCGTTATCTTCTTACTATAATTTTAATTTGTTAATGCTTTTAAGAAACATCTATTGA
PROTEIN sequence
Length: 374
TDRGYTGHEHLTPFGDDSNSGFCLINMNGRIYDPVLARFLSPDPYVQAPDFTQSFNRYAYCWNNPLVYTDPSGEFIFTALLTPIGLTALGVIVDGACWGAVIGGATYTISAAFSQGGLNNWNLKDFGNSMLVGAASGAVFAGMGLIAPSFTVSSTSFASNLPTYLGKAGYAALTGGLSAGAGMLTGDYLDDSKINTPFKDYMKGMGIAAATSGLISFGGSVYDYATWDKYTPAQKVARLQQEFGIRIQHDATNTTDYGYFDPQTSQSKLFITDKGLQSRSMARSTIAHELQHYNDFQNYVVAPIRAGNTPSMTGNAYSNFTERNAYSLELRMANKYALSMNDWMVSAAGAKYYGAALSSYYNFNLLMLLRNIY*