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scnpilot_p_inoc_scaffold_20_curated_324

Organism: scnpilot_dereplicated_Paludibacter_1

near complete RP 51 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 471129..471707

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-24 n=1 Tax=Marinilabilia salmonicolor RepID=UPI00029A5D16 similarity UNIREF
DB: UNIREF100
  • Identity: 49.2
  • Coverage: 183.0
  • Bit_score: 188
  • Evalue 6.30e-45
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 37.4
  • Coverage: 190.0
  • Bit_score: 133
  • Evalue 7.60e-29
Tax=GWE2_Bacteroidetes_42_39_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 43.8
  • Coverage: 192.0
  • Bit_score: 187
  • Evalue 2.00e-44

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Taxonomy

GWE2_Bacteroidetes_42_39_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 579
ATGAACACCAACAAAACAACATTTTCCGAACGGCTCAGAAACGACGATCGGAGTGTAGTGGATGAAATCTATGCATTTTATCATCGCCGCTTGTTTCGTTTTGCGTTGGCCTATTTAAAAAACGACGACGATTCTTACGATATCGTACAGGACGTATTTCTGAAAATCTGGGAAAATCGGTTCAGGCTTCGGTACGATACCAATTTCGATGCCTTCATATTCACGGTCGCCAAAAACTCGGTACTTTCGCTCCTTCGTAAACGCCTCTCCGAACAAAAATATCAGTCGGAAAATTCCGCGGTGCAGGAAGTCGACCACCATCCGATTGAAGAAGATATTGATTATCGGATGATACAACAGAAATATACCGAATTGGTCGATCAACTGCCCTCAAAACGTAAAGAGATCTTCAAACTGAGCCGCGATAGTGGTTTGTCGAATAAGGAAATTGCTTCCCAGAAGGGTATTTCGGAAAAAACAGTCGAAGATCACCTGACCAAATCATTGAGTTTTTTACGTCGCAAATTGGGAAAATTTGGACTGACAGCCTTATTATACATCAGTTTATTTATCGATTGA
PROTEIN sequence
Length: 193
MNTNKTTFSERLRNDDRSVVDEIYAFYHRRLFRFALAYLKNDDDSYDIVQDVFLKIWENRFRLRYDTNFDAFIFTVAKNSVLSLLRKRLSEQKYQSENSAVQEVDHHPIEEDIDYRMIQQKYTELVDQLPSKRKEIFKLSRDSGLSNKEIASQKGISEKTVEDHLTKSLSFLRRKLGKFGLTALLYISLFID*