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scnpilot_p_inoc_scaffold_20_curated_328

Organism: scnpilot_dereplicated_Paludibacter_1

near complete RP 51 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 476487..478106

Top 3 Functional Annotations

Value Algorithm Source
carbohydrate-binding protein SusD n=1 Tax=Spirosoma panaciterrae RepID=UPI00036E85AC similarity UNIREF
DB: UNIREF100
  • Identity: 64.0
  • Coverage: 539.0
  • Bit_score: 733
  • Evalue 1.50e-208
RagB/SusD domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 62.9
  • Coverage: 539.0
  • Bit_score: 725
  • Evalue 9.70e-207
RagB/SusD domain protein {ECO:0000313|EMBL:ADB37271.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.9
  • Coverage: 539.0
  • Bit_score: 725
  • Evalue 4.30e-206

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Taxonomy

Spirosoma linguale → Spirosoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1620
ATGAAAAAAGTAACAAAATATAGCTTTTTGCCGGTCGTGTTATCGTTCCTGATAGGGTCGTGCAACGACCTGGATGTTCCGGTAACCACACAAATCACTCCCGATGTATATCCTCAGGATTCGTCGCAGTTTGTAGCTTCGGCGGGTGTGGTGTATGCTGCTTTGCGTGGCAACTATGCCCACGACTTTTTCTTCGCCCAAACGCTGAGTACCGATGAAGGTATTATGCCGGCGCGCGGCGGTAACTGGTACGACAACCAGGGTTACCGTGTAATGCACTATCATGAATGGACACCCGACCGCAGTTGGTCGTGGGGATGCTGGGACTGGCTCTCGCGGGTCATCAGCTACGACAATCAGACCATGTATATTCTCCGGCGAAACATGCCCGAGGGAGCCTTCAAAAGCCGGATGATGGCCGAGTTGCGGATGGTACGTGCATTGGCGTATTATTACATGATGGACCTGTTCGGCGATGTACCCATCGTTACCGAATACGGCGATTTCGAACCGAAAGCGCAAACGCCCCGGGCCGAAGTGTTTACGTTTATTGAAAAGGAGATTCTGGAGGTTATTCCTGATCTGACGACCAATGTTTCGCCTGCCACTTACGGTTATCCGACTCAGTACATGGCTTATTCGCTGCTTGCCAAAATGTACCTGAATGCCGGATATTATACCGGCACACAGCGGTACAACGATTGCATAGCAGCCTGCGATAAGGTGATAAGCTCGGGCCGGTACACCCTGGCCGACCGCAACGAATACCTGAAATTGTTCTATCCCGATAATGGTCCCGGCACCAAAGAGTTTATTTTTGCCATTCCGTTCGATCCCACCTATGTACCGCTTTCGGGTACTTCGGGATATTTGTACCGGGCGCGTTACGATGTTCCCCGCTCGCTTCGCGCCAAGTTTGGCCTGCCGTTTACTCCCAGTGCTCCTATGAGTACCCTGCCCGAGCATTATGCCTTGTTCGACGATCCGAACGATGTGCGCAACGGTCAGTGGCTCACCGGCTTGCAGTATCTCAACGACGGGGTTACTCCGGTAAAGGTAACCACCACCAACAAAGGCTACAATCAGTTTTACAGCGGTCCCGATGCCGGTGCTGCGTACACCTATCACGTGGAGCTTACCCCGAACATCGTACTGCGCCAGGATTCGCTGATGTTTGATGCCGGTAACGACGAGATTTCGTGGAACATGGGTTACCGGAATATTAAGTTTTATCCCGATGCTACTTCAACCACCCGTAACCAGAACAACGACATGCCGGTGTTCCGTTACGCCGATATTTTGTTGATGAAAGCCGAAGCCCTTTTGCGCGGAGGTACAGCCACTCTCGGGCATACTGCCCTGTCGCTGGTCAACATGGTGCGCGAGAAACGCACCACGTCGCCTGCATGGACTGGTGTTACGCTCGACGCGTTGTACAACGAGCGCGGTCGCGAATTCACCTACGAGTTGTGGCGTCGCAACGATATGATCCGTTTTGGCAAGTACGAAGATAAATGGGGCTTTAAGGTGGATTCGGATCCCAGAAAGCGAATTTTTCCGATCCCTACCGGAGCGCTGGTGAAAAACCCGAAACTGGTTCAGAATCCGGGTTACAATTGA
PROTEIN sequence
Length: 540
MKKVTKYSFLPVVLSFLIGSCNDLDVPVTTQITPDVYPQDSSQFVASAGVVYAALRGNYAHDFFFAQTLSTDEGIMPARGGNWYDNQGYRVMHYHEWTPDRSWSWGCWDWLSRVISYDNQTMYILRRNMPEGAFKSRMMAELRMVRALAYYYMMDLFGDVPIVTEYGDFEPKAQTPRAEVFTFIEKEILEVIPDLTTNVSPATYGYPTQYMAYSLLAKMYLNAGYYTGTQRYNDCIAACDKVISSGRYTLADRNEYLKLFYPDNGPGTKEFIFAIPFDPTYVPLSGTSGYLYRARYDVPRSLRAKFGLPFTPSAPMSTLPEHYALFDDPNDVRNGQWLTGLQYLNDGVTPVKVTTTNKGYNQFYSGPDAGAAYTYHVELTPNIVLRQDSLMFDAGNDEISWNMGYRNIKFYPDATSTTRNQNNDMPVFRYADILLMKAEALLRGGTATLGHTALSLVNMVREKRTTSPAWTGVTLDALYNERGREFTYELWRRNDMIRFGKYEDKWGFKVDSDPRKRIFPIPTGALVKNPKLVQNPGYN*