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scnpilot_p_inoc_scaffold_309_curated_70

Organism: scnpilot_dereplicated_Paludibacter_1

near complete RP 51 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 96260..97243

Top 3 Functional Annotations

Value Algorithm Source
Sigma factor regulatory protein, FecR/PupR family n=3 Tax=Bacteroides RepID=E4VX40_BACFG similarity UNIREF
DB: UNIREF100
  • Identity: 54.0
  • Coverage: 326.0
  • Bit_score: 342
  • Evalue 4.50e-91
Anti-sigma factor {ECO:0000313|EMBL:KER50892.1}; TaxID=817 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.0
  • Coverage: 326.0
  • Bit_score: 343
  • Evalue 2.80e-91
putative anti-sigma factor similarity KEGG
DB: KEGG
  • Identity: 53.0
  • Coverage: 330.0
  • Bit_score: 341
  • Evalue 3.10e-91

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Taxonomy

Bacteroides fragilis → Bacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 984
ATGATAGATCCAACGATTATCGATAAAGTACTTTCGAAGACAGCCTCTCCGGCCGAAGCGCGTAAGGTTGCGGCCTGGTTTGCTACTGCCGAAGGACAGGAATATTTCTCCCGGCGCTACGACAGAGAATCGTATTTGCTCAATGAAAACATCCTTTCCGAATGGTTGGACCATGACGTGCCGACCGACCGGATGAAGGTTCGTTTCGTGTCGCAGCTGAAAGTACGAATACGTACCTTTCGTTTCAGGGTAGTTGCTGCGGTTATTATTCCCTTTATTGTTTTGGCAGGTGCCTTTATATTTGTAGCTGATCGTACCGGTGTGTTTGCAAACACCGGTATGGCCGAGGTTATAGTCCCGTACGGAGAACAGGTACGGGTAGTTCTTCAGGATGGAACGGTCGTACAGCTTAATTCCGGATCGCATTTACAATATCCGAAATCGTTCGGGCTTTTCAGCCGGAATGTAAAACTTTCGGGCGAAGGATATTTTTCCGTGGCAAAAGAAGCCAGACCATTTATAGTGAATTTAGAAGAGATTGTTGTAAAAGTTACAGGAACGAAGTTCAATGCCAAAGCATACCTCGATGATGATCTGATTACAGTTTCGTTGGAAGAAGGGAGCGTGAATATTGCCGATAAAAGTAATAATGTATATCCGTTGAAGGTAGGTGAAAATGCAGATTATGACAGGAGTTCGGGAATATGTACCGTGAATCGGATTGAAGATATGACTTTGCATACTGCATGGCGAACTAAAAGTTTGAATTTTTACAGAACACCGCTGAAAGAAATTCTCAAAACCCTCGAACGGCAATATGAAGTACAATTTGTTGTCAATGATCCATCCTTGTTAAATTATAAGTTCAGTATTTCAACCAGTCGTATCAATGCGAGTGAAATATTGATGGATTTAGAGAAAGTCTCAAAAATCATTTTTACGCCCAAAGATAGTAATATGTACGAAGTATCCTCATTAAAGTAG
PROTEIN sequence
Length: 328
MIDPTIIDKVLSKTASPAEARKVAAWFATAEGQEYFSRRYDRESYLLNENILSEWLDHDVPTDRMKVRFVSQLKVRIRTFRFRVVAAVIIPFIVLAGAFIFVADRTGVFANTGMAEVIVPYGEQVRVVLQDGTVVQLNSGSHLQYPKSFGLFSRNVKLSGEGYFSVAKEARPFIVNLEEIVVKVTGTKFNAKAYLDDDLITVSLEEGSVNIADKSNNVYPLKVGENADYDRSSGICTVNRIEDMTLHTAWRTKSLNFYRTPLKEILKTLERQYEVQFVVNDPSLLNYKFSISTSRINASEILMDLEKVSKIIFTPKDSNMYEVSSLK*