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scnpilot_p_inoc_scaffold_85_curated_67

Organism: scnpilot_dereplicated_Paludibacter_1

near complete RP 51 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 106369..106950

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2F0_PALPW similarity UNIREF
DB: UNIREF100
  • Identity: 47.2
  • Coverage: 195.0
  • Bit_score: 148
  • Evalue 5.60e-33
helix-turN-helix domain protein similarity KEGG
DB: KEGG
  • Identity: 47.2
  • Coverage: 195.0
  • Bit_score: 148
  • Evalue 1.80e-33
Helix-turn-helix domain protein {ECO:0000313|EMBL:ADQ78894.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.2
  • Coverage: 195.0
  • Bit_score: 148
  • Evalue 7.90e-33

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Taxonomy

Paludibacter propionicigenes → Paludibacter → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 582
ATGAGTGAAAAAAATAGAATTGAAAAAGTGATTCAGTATTTAGAAATGACTTCTGGTCAATTTGCTGCTGAAATCGGGGTACAAAATTCGACCCTCTCTCACATCCTGAATAATCGAAACAATCCGAGTCTGGAAGTACTGAAAAAAATACTGAGCCGGTTTACTGAGATTAGCGCAGATTGGCTTATTTTAGGCCAAGGCTCTATGTTGCGCTTTGAAAAGCAATCTAAAGAGCCCACATTATTCGATTCGATGGATGAAAATAGCTCACTTTCAGATAATTCAGTTTCCGGAAATGTCCCAAAAAACGCATCGCTTACAGGAAGCATCCGTGACGAAATGTTAAAAAATATTGCAACTGCACCCGGAAATGTATCAGAGCATCAAACTGCACTGTCAAACAGACTCCAGCAATCTGCCGGCGAACAACAACCGCCTAAAAATATGGAGTCTGTTCCAAAAGCCATCCGGTTGCCCGACAATTTCAGTCCCGAGCATACCGGCATTAAATCCGATCGTAAAGTAACCAAAGTAATATTGTATTTCACCGATAATACATTTCAGGAGTTCGAATCAAAATAA
PROTEIN sequence
Length: 194
MSEKNRIEKVIQYLEMTSGQFAAEIGVQNSTLSHILNNRNNPSLEVLKKILSRFTEISADWLILGQGSMLRFEKQSKEPTLFDSMDENSSLSDNSVSGNVPKNASLTGSIRDEMLKNIATAPGNVSEHQTALSNRLQQSAGEQQPPKNMESVPKAIRLPDNFSPEHTGIKSDRKVTKVILYFTDNTFQEFESK*