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scnpilot_p_inoc_scaffold_742_curated

Search features with annotation key words

Displaying items 61-90 of 92 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_742_curated_61
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

Not on your lists

comp(73716..74813)
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NUQ5_GRAMM
hypothetical protein
Tax=RBG_16_Acidobacteria_64_8_curated
scnpilot_p_inoc_scaffold_742_curated_62
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(74908..77274)
DNA (2367bp) protein (789aa)
heavy metal translocating P-type ATPase (EC:3.6.3.-); K01534 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5] id=12557519 bin=CNBR_ACIDO species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
heavy metal translocating P-type ATPase (EC:3.6.3.-); K01534 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5]
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:BAH38349.1}; EC=3.6.3.- {ECO:0000313|EMBL:BAH38349.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
scnpilot_p_inoc_scaffold_742_curated_63
unknown

Not on your lists

comp(77271..77456)
DNA (186bp) protein (62aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_742_curated_64
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

77570..77968
DNA (399bp) protein (133aa)
IS298, transposase OrfA n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WL55_VEREI
IS298, transposase OrfA
IS298, transposase OrfA {ECO:0000313|EMBL:ABM58362.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
scnpilot_p_inoc_scaffold_742_curated_65
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

77965..78393
DNA (429bp) protein (143aa)
Transposase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YMB0_9RHIZ
transposase, IS4 family protein
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
scnpilot_p_inoc_scaffold_742_curated_66
unknown

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comp(78702..79115)
DNA (414bp) protein (138aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_742_curated_67
alpha proteobacterium IMCC14465, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(79222..79464)
DNA (243bp) protein (81aa)
Restriction-modification system regulatory protein, putative n=1 Tax=alpha proteobacterium IMCC14465 RepID=J9DGC6_9PROT
Restriction-modification system regulatory protein, putative {ECO:0000313|EMBL:EJW20936.1}; TaxID=1220535 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium IMCC14465.;"
Helix-turn-helix protein
scnpilot_p_inoc_scaffold_742_curated_68

Not on your lists

79683..81311
DNA (1629bp) protein (543aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002ECA265
Marine sediment metagenome DNA, contig: S01H1_S11779 {ECO:0000313|EMBL:GAG01894.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
scnpilot_p_inoc_scaffold_742_curated_69
Luminiphilus syltensis, Luminiphilus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

81415..82857
DNA (1443bp) protein (481aa)
Morn variant repeat protein n=1 Tax=Luminiphilus syltensis NOR5-1B RepID=B8KSJ2_9GAMM
Morn variant repeat protein {ECO:0000313|EMBL:EED35662.1}; TaxID=565045 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Luminiphilus.;" source="Luminiphilus syltensis NOR5-1B.;"
hypothetical protein
scnpilot_p_inoc_scaffold_742_curated_70
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

82955..84097
DNA (1143bp) protein (381aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DIG5_SINAD
endopeptidase Clp ATP-binding regulatory subunit ClpX
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_742_curated_71
unknown

Not on your lists

comp(84745..84843)
DNA (99bp) protein (33aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_742_curated_72
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(84881..85192)
DNA (312bp) protein (104aa)
Type I restriction-modification system methyltransferase subunit n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8X0P6_ACISM
type I restriction-modification system methyltransferase subunit
Type I restriction-modification system methyltransferase subunit {ECO:0000313|EMBL:ADW68997.1}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9).;"
scnpilot_p_inoc_scaffold_742_curated_73
unknown

Not on your lists

comp(86185..86433)
DNA (249bp) protein (83aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_742_curated_74
Mycobacterium tuberculosis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

86657..87073
DNA (417bp) protein (139aa)
Transposase n=4 Tax=Mycobacterium tuberculosis RepID=Q50761_MYCTU
Transposase {ECO:0000313|EMBL:CAA46571.1}; TaxID=1773 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacterium tuberculosis.;"
Putative transposase
scnpilot_p_inoc_scaffold_742_curated_75
unknown

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87051..87476
DNA (426bp) protein (142aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_742_curated_76
Rhodopirellula sallentina, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(87597..88610)
DNA (1014bp) protein (338aa)
Kelch repeat type 1-containing protein n=1 Tax=Rhodopirellula sallentina SM41 RepID=M5UIJ8_9PLAN
Kelch repeat type 1-containing protein {ECO:0000313|EMBL:EMI57671.1}; TaxID=1263870 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sallentina SM41.;"
hypothetical protein
scnpilot_p_inoc_scaffold_742_curated_77
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(88730..90196)
DNA (1467bp) protein (489aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002E44AE9
heavy metal sensor signal transduction histidine kinase
scnpilot_p_inoc_scaffold_742_curated_78

Not on your lists

comp(90180..90854)
DNA (675bp) protein (225aa)
transcriptional regulator n=1 Tax=Zavarzinella formosa RepID=UPI0003176710
DNA-binding heavy metal response regulator {ECO:0000313|EMBL:EQD44685.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
two component transcriptional regulator, winged helix family; K07665 two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
scnpilot_p_inoc_scaffold_742_curated_79
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

91109..91444
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000362D5B7
Transcriptional regulator, PadR-like family {ECO:0000313|EMBL:EEF62678.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PadR family transcriptional regulator
scnpilot_p_inoc_scaffold_742_curated_80
unknown

Not on your lists

91479..92291
DNA (813bp) protein (271aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_742_curated_81
unknown

Not on your lists

92294..92581
DNA (288bp) protein (96aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_742_curated_82
unknown

Not on your lists

comp(92686..93099)
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029A349B
scnpilot_p_inoc_scaffold_742_curated_83
Isosphaera pallida, Isosphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(93129..94121)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8QYB3_ISOPI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV63108.1}; Flags: Precursor;; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
scnpilot_p_inoc_scaffold_742_curated_84
unknown

Not on your lists

94323..94496
DNA (174bp) protein (58aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_742_curated_85
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

95598..96116
DNA (519bp) protein (173aa)
Tax=RBG_16_Planctomycetes_64_12_curated
scnpilot_p_inoc_scaffold_742_curated_86
unknown

Not on your lists

96113..96676
DNA (564bp) protein (188aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_742_curated_87
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

96833..99937
DNA (3105bp) protein (1035aa)
Heavy metal efflux pump, cobalt-zinc-cadmium n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DSP2_SINAD
Heavy metal efflux pump, cobalt-zinc-cadmium {ECO:0000313|EMBL:AGA31381.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
heavy metal efflux pump
scnpilot_p_inoc_scaffold_742_curated_88
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(99994..100944)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZNB0_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EAQ81805.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
hypothetical protein; K08994 putative membrane protein
scnpilot_p_inoc_scaffold_742_curated_89
unknown

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comp(101038..101295)
DNA (258bp) protein (86aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_742_curated_90
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(101949..103772)
DNA (1824bp) protein (608aa)
Heavy metal translocating P-type ATPase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WK06_9BURK
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EHR70978.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
heavy metal translocating P-type ATPase
Displaying items 61-90 of 92 in total

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