ggKbase home page

scnpilot_p_inoc_scaffold_335_curated

Search features with annotation key words

Displaying items 31-60 of 79 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_335_curated_31
Mesorhizobium sp. LNJC394B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36687..37232
DNA (546bp) protein (182aa)
UPI0003D026D7 related cluster n=1 Tax=unknown RepID=UPI0003D026D7
Uncharacterized protein {ECO:0000313|EMBL:ESY24182.1}; TaxID=1287274 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC394B00.;"
hypothetical protein
scnpilot_p_inoc_scaffold_335_curated_32
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37863..38429)
DNA (567bp) protein (189aa)
maltose O-acetyltransferase; K00661 maltose O-acetyltransferase [EC:2.3.1.79]
Maltose O-acetyltransferase n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CG67_MYXFH
Maltose O-acetyltransferase {ECO:0000313|EMBL:AEI67419.1}; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus (strain ATCC BAA-855 / HW-1).;"
scnpilot_p_inoc_scaffold_335_curated_33
unknown

Not on your lists

comp(38419..38781)
DNA (363bp) protein (121aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_335_curated_34

Not on your lists

comp(38785..38988)
DNA (204bp) protein (68aa)
Uncharacterized protein {ECO:0000313|EMBL:AHZ46183.1}; TaxID=1497525 species="Bacteria; environmental samples.;" source="uncultured bacterium 14-4D.;"
Putative uncharacterized protein id=4323153 bin=GWF2_Lentisphaerae_52_8 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
hypothetical protein
scnpilot_p_inoc_scaffold_335_curated_35

Not on your lists

comp(39015..39431)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DSY2_SINAD
Uncharacterized protein {ECO:0000313|EMBL:KKL83915.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
scnpilot_p_inoc_scaffold_335_curated_36
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(39447..41303)
DNA (1857bp) protein (619aa)
Putative carbamoyl transferase; K00612 carbamoyltransferase [EC:2.1.3.-]
Nodulation protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CB24_9PLAN
Tax=RBG_13_Planctomycetes_62_9_curated
scnpilot_p_inoc_scaffold_335_curated_37
Isosphaera pallida, Isosphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

41616..42398
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R6W1_ISOPI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV64304.1}; Flags: Precursor;; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
scnpilot_p_inoc_scaffold_335_curated_38
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

42835..45222
DNA (2388bp) protein (796aa)
Capsular exopolysaccharide biosynthesis protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DK20_SINAD
capsular exopolysaccharide biosynthesis protein
Capsular exopolysaccharide biosynthesis protein {ECO:0000313|EMBL:AGA29602.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_335_curated_39
Isosphaera pallida, Isosphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

45360..46319
DNA (960bp) protein (320aa)
Eight transmembrane protein EpsH n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R6W3_ISOPI
transmembrane protein EpsH
Eight transmembrane protein EpsH {ECO:0000313|EMBL:ADV64306.1}; Flags: Precursor;; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
scnpilot_p_inoc_scaffold_335_curated_40
Rhodopirellula sp. SWK7, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

46316..47155
DNA (840bp) protein (280aa)
Glycosyl transferase WecB/TagA/CpsF {ECO:0000313|EMBL:EMI41878.1}; EC=2.4.1.- {ECO:0000313|EMBL:EMI41878.1};; TaxID=595460 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sp. SWK7.;"
UDP-N-acetyl-D-mannosaminuronic acid transferase (EC:2.4.1.-); K00754 [EC:2.4.1.-]
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0003759846
scnpilot_p_inoc_scaffold_335_curated_41
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

47145..47741
DNA (597bp) protein (199aa)
D,D-heptose 1,7-bisphosphate phosphatase {ECO:0000256|PIRNR:PIRNR004682}; EC=3.1.3.- {ECO:0000256|PIRNR:PIRNR004682};; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
hypothetical protein n=1 Tax=Singulisphaera acidiphila RepID=UPI0002FA3A13
histidinol-phosphate phosphatase family protein
scnpilot_p_inoc_scaffold_335_curated_42
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

47738..48967
DNA (1230bp) protein (410aa)
Glycosyl transferase, group 1 family protein n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4W1J8_9CYAN
Glycosyl transferase, group 1 family protein {ECO:0000313|EMBL:EDX71945.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus chthonoplastes PCC 7420.;"
glycosyltransferase
scnpilot_p_inoc_scaffold_335_curated_43
Oscillatoriales cyanobacterium JSC-12, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(48978..50096)
DNA (1119bp) protein (373aa)
Putative dehydrogenase n=1 Tax=Oscillatoriales cyanobacterium JSC-12 RepID=K8GMJ9_9CYAN
Putative dehydrogenase {ECO:0000313|EMBL:EKQ70212.1}; TaxID=864702 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales.;" source="Oscillatoriales cyanobacterium JSC-12.;"
oxidoreductase domain-containing protein
scnpilot_p_inoc_scaffold_335_curated_44
Oscillatoriales cyanobacterium JSC-12, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(50093..51229)
DNA (1137bp) protein (379aa)
Putative dehydrogenase n=1 Tax=Oscillatoriales cyanobacterium JSC-12 RepID=K8GMP2_9CYAN
putative dehydrogenase
Putative dehydrogenase {ECO:0000313|EMBL:EKQ70213.1}; TaxID=864702 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales.;" source="Oscillatoriales cyanobacterium JSC-12.;"
scnpilot_p_inoc_scaffold_335_curated_45
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(51252..52190)
DNA (939bp) protein (313aa)
NAD-dependent epimerase/dehydratase family protein n=1 Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IBB8_PHYMF
NAD-dependent epimerase/dehydratase family protein
NAD-dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:BAM02556.1}; TaxID=1142394 species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 /; FYK2301M01).;"
scnpilot_p_inoc_scaffold_335_curated_46
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52218..52769)
DNA (552bp) protein (184aa)
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TQ41_TISMK
dTDP-4-dehydrorhamnose 3,5-epimerase
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:AFK54879.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
scnpilot_p_inoc_scaffold_335_curated_47
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(52835..53833)
DNA (999bp) protein (333aa)
NAD-dependent epimerase/dehydratase family protein n=1 Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IAZ5_PHYMF
NAD-dependent epimerase/dehydratase family protein
NAD-dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:BAM02433.1}; TaxID=1142394 species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 /; FYK2301M01).;"
scnpilot_p_inoc_scaffold_335_curated_48
Parachlamydia acanthamoebae, Parachlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(53925..54725)
DNA (801bp) protein (267aa)
rfbF; glucose-1-phosphate cytidylyltransferase; K00978 glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
Glucose-1-phosphate cytidylyltransferase {ECO:0000313|EMBL:CCB87583.1}; EC=2.7.7.33 {ECO:0000313|EMBL:CCB87583.1};; TaxID=765952 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Parachlamydia.;" source="Parachlamydia acanthamoebae (strain UV7).;"
Glucose-1-phosphate cytidylyltransferase n=2 Tax=Parachlamydia acanthamoebae RepID=F8KV61_PARAV
scnpilot_p_inoc_scaffold_335_curated_49
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54963..55958
DNA (996bp) protein (332aa)
Glycosyl transferase family 2 n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JFC7_ANAD2
N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase {ECO:0000313|EMBL:GAO03336.1}; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. PSR-1.;"
family 2 glycosyl transferase; K07011
scnpilot_p_inoc_scaffold_335_curated_50
Oscillatoria nigro-viridis, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

56076..57134
DNA (1059bp) protein (353aa)
Glycosyl transferase family 2 n=1 Tax=Oscillatoria nigro-viridis PCC 7112 RepID=K9VMP5_9CYAN
glycosyl transferase family 2
Glycosyl transferase family 2 {ECO:0000313|EMBL:AFZ08747.1}; TaxID=179408 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria nigro-viridis PCC 7112.;"
scnpilot_p_inoc_scaffold_335_curated_51
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57207..59417
DNA (2211bp) protein (737aa)
Oxidoreductase, Gfo/Idh/MocA family protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X0M5_9BRAD
Oxidoreductase, Gfo/Idh/MocA family protein {ECO:0000313|EMBL:EAQ34210.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
Gfo/Idh/MocA family oxidoreductase
scnpilot_p_inoc_scaffold_335_curated_52
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59567..60463
DNA (897bp) protein (299aa)
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1536652 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus sp. Tol-SR.;"
Putative polysaccharide ABC transporter permease protein id=2919791 bin=GWC2_Chloroflexi_49_37 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
ABC transporter membrane protein; K09690 lipopolysaccharide transport system permease protein
scnpilot_p_inoc_scaffold_335_curated_53
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60524..61813
DNA (1290bp) protein (430aa)
ABC transporter, ATP-binding protein n=1 Tax=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) RepID=Q74D14_GEOSL
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AJY71608.1}; TaxID=35554 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens.;"
ABC transporter ATP-binding protein; K09691 lipopolysaccharide transport system ATP-binding protein rbh
scnpilot_p_inoc_scaffold_335_curated_54
Geobacter sp. M21, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62260..63669
DNA (1410bp) protein (470aa)
rfaE bifunctional protein; K03272 D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
Bifunctional protein HldE n=1 Tax=Geobacter sp. (strain M21) RepID=C6E4X3_GEOSM
Bifunctional protein HldE {ECO:0000256|HAMAP-Rule:MF_01603, ECO:0000256|SAAS:SAAS00015122}; TaxID=443144 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M21).;"
scnpilot_p_inoc_scaffold_335_curated_55
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

64479..65162
DNA (684bp) protein (228aa)
Gll2188 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NIJ5_GLOVI
glycosyl transferase
Gll2188 protein {ECO:0000313|EMBL:BAC90129.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
scnpilot_p_inoc_scaffold_335_curated_56
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(65256..66764)
DNA (1509bp) protein (503aa)
FHA domain-containing protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DLS3_SINAD
FHA domain-containing protein
FHA domain-containing protein {ECO:0000313|EMBL:AGA29621.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_335_curated_57
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

67027..67917
DNA (891bp) protein (297aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
Glucose-1-phosphate thymidylyltransferase n=2 Tax=Singulisphaera acidiphila RepID=L0DRK4_SINAD
dTDP-glucose pyrophosphorylase
scnpilot_p_inoc_scaffold_335_curated_58
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(67969..72396)
DNA (4428bp) protein (1476aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DLB4_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA29620.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_335_curated_59
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

73325..74872
DNA (1548bp) protein (516aa)
Replication initiator protein A n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DRJ9_SINAD
replication initiator protein A
Replication initiator protein A {ECO:0000313|EMBL:AGA31607.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_335_curated_60
unknown

Not on your lists

comp(75059..75526)
DNA (468bp) protein (156aa)

This feature has no annotations

Displaying items 31-60 of 79 in total

View Taxonomy