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scnpilot_p_inoc_scaffold_4336_curated_2

Organism: scnpilot_dereplicated_Planctomycetales_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 14 / 38 MC: 3
Location: comp(926..1189)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulators, LysR family n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BTM7_GRABC similarity UNIREF
DB: UNIREF100
  • Identity: 75.9
  • Coverage: 87.0
  • Bit_score: 141
  • Evalue 3.10e-31
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 75.9
  • Coverage: 87.0
  • Bit_score: 141
  • Evalue 9.80e-32
Transcriptional regulators, LysR family {ECO:0000313|EMBL:ABI61826.1}; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.9
  • Coverage: 87.0
  • Bit_score: 141
  • Evalue 4.40e-31

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Taxonomy

Granulibacter bethesdensis → Granulibacter → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 264
ATGCCGGTTCGGGGCCGTGTCACCGTCAACAGTGCGGAAGCTTACATTGCATGTGCGCTTGCAGGCCTCGGCCTGATCCAGATTCCGGCCTATGATGTCCGCGATCATCTGGACGCAGGGGAGCTGATCGAGGTGATGCCGGAGCATCGTGCGGCGCCCTTGCCGCTGACGCTGCTCTATCCGACGCGCCAGCAACTCTCGCACCGTTTCCAGGTTTTCTCCGGCTGGCTCGAAGATTTGCTCCGGCGTCGCGTCCTGCGTTAG
PROTEIN sequence
Length: 88
MPVRGRVTVNSAEAYIACALAGLGLIQIPAYDVRDHLDAGELIEVMPEHRAAPLPLTLLYPTRQQLSHRFQVFSGWLEDLLRRRVLR*