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scnpilot_p_inoc_scaffold_908_curated_28

Organism: scnpilot_dereplicated_Planctomycetales_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 14 / 38 MC: 3
Location: 30157..30786

Top 3 Functional Annotations

Value Algorithm Source
probable RNA-polymerase sigma-E factor n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C58DA similarity UNIREF
DB: UNIREF100
  • Identity: 51.0
  • Coverage: 200.0
  • Bit_score: 196
  • Evalue 3.30e-47
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48233.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.4
  • Coverage: 197.0
  • Bit_score: 222
  • Evalue 7.90e-55
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 49.7
  • Coverage: 199.0
  • Bit_score: 179
  • Evalue 1.00e-42

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 630
ATGAATCGCGCCGGCGAAACGACCCCGCCCGTCGAACGCCTGCTGGACGCCGCCCGCGGCGGCGACGGCGCGGCCCTCGGCCTCCTGCTGGGGCGATACCACAACTACCTGACCCTCCTGGCGCGGGTGCAGCTCGGCCGCCGGATCCAGGCGAAGCTGGACGTGGCCGACGTCGTCCAGGACGTCTCGCTGGAGGTCCATCGCCGCATCGCCTCCTTCCGGGGCGGGTCCGAGGGGGAGTTCCTGTCGTGGCTGCGGCAGATCCTCGGCGGGGTCCTGGCGAACCAGGTCCGGCGCTACTTCGGCGCCAAGCGCCGCGACGTCCGCCTGGAGCGGGACCTGTTCGAAGACCTCGACCAGTCCTCGCGGGCGATGGCCGCGCCGCTGGTCGCTGCCGAGAGTTCCCCCAGCGCCCAGGCGGCCCGCCGCGAGCAGGCCGTCATCCTGGCCGACGCGCTCGACGACTTGGCCGCCGACTATCGCGAGGTCATCATCCTCCGCCAGCTCCAGGGGCTCAGCTTCCCCGAGGTCGCCGAGCGGATGGGGCGGACGCAGGACAGCGTGAAGAACCTCTGGGCCCGCGCCCTGGCCAAGCTCCGCCGCCGGCTGGAGGCCTTCGATGGAGCCTGA
PROTEIN sequence
Length: 210
MNRAGETTPPVERLLDAARGGDGAALGLLLGRYHNYLTLLARVQLGRRIQAKLDVADVVQDVSLEVHRRIASFRGGSEGEFLSWLRQILGGVLANQVRRYFGAKRRDVRLERDLFEDLDQSSRAMAAPLVAAESSPSAQAARREQAVILADALDDLAADYREVIILRQLQGLSFPEVAERMGRTQDSVKNLWARALAKLRRRLEAFDGA*