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scnpilot_p_inoc_scaffold_865_curated_27

Organism: scnpilot_dereplicated_Planctomycetales_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 14 / 38 MC: 3
Location: 35445..36476

Top 3 Functional Annotations

Value Algorithm Source
rne; ribonuclease E (EC:3.1.4.-); K08300 ribonuclease E [EC:3.1.26.12] similarity KEGG
DB: KEGG
  • Identity: 34.9
  • Coverage: 249.0
  • Bit_score: 67
  • Evalue 1.20e-08
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.9
  • Coverage: 249.0
  • Bit_score: 67
  • Evalue 5.30e-08
Ribonuclease E n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K5X5_AZOSB similarity UNIREF
DB: UNIREF100
  • Identity: 34.9
  • Coverage: 249.0
  • Bit_score: 67
  • Evalue 3.80e-08

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Taxonomy

Azoarcus sp. BH72 → Azoarcus → Rhodocyclales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1032
ATGACGCTACGGCTCGTCTTGATCAGTTTGGTGGCGGGGTTGGGCCTCGGCCTCCCCTCCTGGCCGACGATCGAAGGCTGGGTCGCCGGCGCTCAGAAGTGGATGAACGCCCGCCTCGCGGCGGCCGACGACCGCGAGGGCGAGCGGCACGTCGTCATCCACGACCTGCTCGCGGCGGAGATGGAGCGGGCCCACGCCGCCCGCCAGGCCCGCCGGGCCGCCGCCGCGTCCCCCCTCGCGCCCCGCCCCGCCCTCATCGCGGTCGCCCACTCGACCGCCCCTCGCCGTCCCGCGGCCGCGGCCACGCCCGCCGCGCCCTCGCTCCCGATCCCCCTGCCGAAGCTCGACGACTTCCTGGCCGCCGCGGCGACCGCCCCCGTCCCCGCCCCCGAGGCCCCGACCCTGGCCGTCGCCCGCCCGGACGACCTGGCGGTGCTCGCCTGGGGCCGCATCCGTCCCGGGGCGTCCCGCCTGGCGGCGGCGATGGCCGCGGGCCTCCGCGAGGCCGCCGGGCGCGACCGCGACGCCCGCGCCTTCGTCGCCATGGAGGGTTCGGACGACCTCTACTTCGACGCCGCCGTCCCGGCCGAGCCCGCCCCGCTCCCCGCCGAGGCCGTCGCCGCCGTCGAGGGCCCCGAACCGCTGGCCATCGAGGGGCCCGCCCCCGAGGCCCTCGCCGTCGAGCCCGCCCCGCTCCCCGACTTCGACGCGATGGAGCGGAGCGCCGACCTCTACTTCGCCGCCCCGATCGTCGATGAATCGGCCCCCGCCCCCGAGGCGATGCTGGCCGAGGCCCCCGAGCCGGCCGCCATCGAGGAGGCCCTGGGCCTGGCCGAGCTGCCGGCCGACGTCTTCGCCCCGGTCGAGGCCGGGCCCGTGGTCGCCGTCGTCGTCGCCCCCGAGCCGACGCCCGCCTCGCCCGAGGTCAACCGGGCCGTCCGCCTGACCGGCGAGGCCCTCTCGGCCTGGATCAACGTCCTGACCGGCCCCGCCCTGGTGACCGCCTCGCACGGCGGCGCGGTCGCCCGCTGA
PROTEIN sequence
Length: 344
MTLRLVLISLVAGLGLGLPSWPTIEGWVAGAQKWMNARLAAADDREGERHVVIHDLLAAEMERAHAARQARRAAAASPLAPRPALIAVAHSTAPRRPAAAATPAAPSLPIPLPKLDDFLAAAATAPVPAPEAPTLAVARPDDLAVLAWGRIRPGASRLAAAMAAGLREAAGRDRDARAFVAMEGSDDLYFDAAVPAEPAPLPAEAVAAVEGPEPLAIEGPAPEALAVEPAPLPDFDAMERSADLYFAAPIVDESAPAPEAMLAEAPEPAAIEEALGLAELPADVFAPVEAGPVVAVVVAPEPTPASPEVNRAVRLTGEALSAWINVLTGPALVTASHGGAVAR*