ggKbase home page

scnpilot_p_inoc_scaffold_387_curated_5

Organism: scnpilot_dereplicated_Planctomycetales_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 14 / 38 MC: 3
Location: 3699..4973

Top 3 Functional Annotations

Value Algorithm Source
capsid protein n=1 Tax=Thioalkalivibrio sp. ALgr3 RepID=UPI000361051A similarity UNIREF
DB: UNIREF100
  • Identity: 28.0
  • Coverage: 435.0
  • Bit_score: 145
  • Evalue 1.40e-31
Phage major capsid protein, HK97 family {ECO:0000313|EMBL:EJK79984.1}; Flags: Precursor;; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. AP49.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 28.8
  • Coverage: 420.0
  • Bit_score: 134
  • Evalue 3.40e-28
phage phi-C31 gp36 major capsid-like protein similarity KEGG
DB: KEGG
  • Identity: 32.8
  • Coverage: 357.0
  • Bit_score: 133
  • Evalue 1.30e-28

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingobium sp. AP49 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1275
ATGAATCCGAACGACCTCCGCCGCCGGGCCGCCGAGCTGCTGTCGCAGGCCGAGGCCCTCCTGGCCGGCGTCCCCGAGGGCGAGGAGCCCCCGGCCGACCTATCCCAGCGGCACGACGACCTGGCCGCCCAGGCCGAGGCCCTGATCGACCGGGCGGAGCAGCTGGAGGCCATGGAGTCCCGCCGGGCCGCCCTGGCCGCCCGCGCCGCCGCCGGGCCCGGGGCGGGCGGCGGCGCGGCCCACGACGCCCGGAACACCCGCGGCGGCCGGCACGCCTACAGCGCCGCCCGCGCCCTGTCGTTCGCGGCCTCCGACCGCACGCCCGACGGCCTCGAGGGCGAGGTCCACTCCGACCTGGCGCGATCGCGGACCGTGGCGACCAAGGGCGTCCTCGTCGACATGACGGCCGCCGAGGTCGAGTATCGCGCCCACTCCGCGGCCGGGGCGATCGGCCAGGTCGTCGTGGGGCCGATTTGGCAGGCCCTGATGGCCCAGCTCGTCCTGTCCCAGGCCGGCATGCAGACCCTGGTCTCCTCGAGCCCGTTCAAGCTGCCGCTCGCGACGGCGGGCAACACCTACTGGGTGAGCAACGCCGCTCCGACCGAGGCCGACCGCTCGATCGGCTCGGCCGCGTTCTCGGCCCACACGCTCGCGGGCTCGACCGTCGCCGGCCGCCAGGACCTGGTGCAGTCCTCGGTGCCGCTGACCAACTACCTGTACTCGCAGCTCCTCGCCGACCTGGCCGTCGGGCTGCAGGCGGGCTGCCTGCACGGCTCGGGCGCGGCGGGCCAGCCCAAGGGCGCCTTCGCCTACGTCGCCGGCGACGGCGTCGACGTCCGCCCCGGCGCGACCAACGGCAAGGCGCTGACCTACGACGACGTCCTCGCGATGACCGGGGCCGTCGCCAAGGCCAACGCGGGCGAGGGCGCGTTCGTCACCAACCCCGCCGTGTTCAGCAAGCTCGAGGGGACGGTCAAGGTGACCGGCCAGGCGTCCTTCGTGGCGAGCGCCGATTCGATGACGATCGCCGACCGCCGCGCGCTGACGACCAGCTCGGTGCGGGCCGACCTGACCAAGGGCTCCGGAACGGGCCTCTCCGCGATCATCTACGGTGACTGGACCAAGGCGCTGCTCGCGATGTTCAGCGGCATGGACATGCTGGTCAACCCCTACCGGGCCGACGGCGGCGTCCAGGTCTCGGGGTTCGTCGACGTCGACTTCGGCCTGGTCCGCCCCGCCGCGTTCAGCATCGCGACCGACGTCGTCTACTCCTGA
PROTEIN sequence
Length: 425
MNPNDLRRRAAELLSQAEALLAGVPEGEEPPADLSQRHDDLAAQAEALIDRAEQLEAMESRRAALAARAAAGPGAGGGAAHDARNTRGGRHAYSAARALSFAASDRTPDGLEGEVHSDLARSRTVATKGVLVDMTAAEVEYRAHSAAGAIGQVVVGPIWQALMAQLVLSQAGMQTLVSSSPFKLPLATAGNTYWVSNAAPTEADRSIGSAAFSAHTLAGSTVAGRQDLVQSSVPLTNYLYSQLLADLAVGLQAGCLHGSGAAGQPKGAFAYVAGDGVDVRPGATNGKALTYDDVLAMTGAVAKANAGEGAFVTNPAVFSKLEGTVKVTGQASFVASADSMTIADRRALTTSSVRADLTKGSGTGLSAIIYGDWTKALLAMFSGMDMLVNPYRADGGVQVSGFVDVDFGLVRPAAFSIATDVVYS*