ggKbase home page

scnpilot_p_inoc_scaffold_5051_curated_3

Organism: scnpilot_dereplicated_Planctomycetales_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 14 / 38 MC: 3
Location: comp(1953..6227)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 similarity UNIPROT
DB: UniProtKB
  • Identity: 88.2
  • Coverage: 999.99
  • Bit_score: 2513
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=2 Tax=Singulisphaera acidiphila RepID=L0D6B1_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 88.2
  • Coverage: 999.99
  • Bit_score: 2513
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta'' similarity KEGG
DB: KEGG
  • Identity: 88.2
  • Coverage: 999.99
  • Bit_score: 2513
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 4275
GTGAGCATGGGCGAAAGTGCCTACGATCGCATCAACGACTACGGGGCCGTGAAGATCGGCCTCGCGAGCCCGTACGACATCCGCAGCTGGTCGTTCGGCGAGGTCAAGAAGCCCGAGACGATCAACTATCGGACCTACCGCCCCGAGAAGGACGGGCTCTTCTGCGAGCGGATCTTCGGCCCCGAGAAGGACTGGGAGTGCGCCTGCGGCAAGTACCGCGGGATGAAGTACAAGGGGATGATCTGCGACCGCTGCGGCGTCAAGGTGACGCACAGCCGCGTCCGCCGCAAGCGCATGGGCCACATCGAGCTGGCCGCGCCGGTCGTCCACATCTGGTTCTTCAAGGCCATGCCCAGCCGCCTGGGCACGCTCCTGGACATGAAGACGTCCAGCCTGGAGCGGATCATCTACTTCCAGGACTACGTCGTCGTCGAGGCCGGCGACACGCCCCTGAAGGAGACCCAGCTCCTCACCGAGGAGGACTTCCGCAAGGCCCGCGAGGCCTACGGCGACGGCTTCCAGGCCGACATGGGCGCCGAGGCCGTCCGCAAGCTCCTCATGCGGCTCGACCTGGTCAGCCTCTCCAAGACCCTGCGCGAGAACCTCCAGGAGACGACCAGCAAGCAGAAGATCAAGGACCTCACCAAGCGGCTGAAGGTCGTCGAGGCCCTGCGCGACAGCGACAACCGGCCGGAGTGGATGGTCCTGGAGGCGATCCCGGTCATCCCGCCCGACCTCCGCCCGCTCGTCCTCCTGGACAGCGGCAACTTCGCCACGTCCGACCTGAACGACCTCTACCGCCGCATCATCAACCGGAACAACCGGCTGAAGAAGCTGGTGGACCTGAACGCGCCCGAGGTCATCATCCGCAACGAGAAGCGGATGCTCCAGCAGGCCGTCGACGCCCTGTTCGACAACAACCGCTGCAAGCGGCCCGTGCTGGGCAGCTCCAACCGCCCGCTCAAGTCGCTCACCGACATGATCAAGGGCAAGCAGGGCCGCTTCCGCGAGAACCTGCTGGGCAAGCGCGTCGACTACTCGGCCCGGTCGGTCATCGTCGTCGGACCGGACCTCAAGCTCCACCAGTGCGGCCTCCCCAAGAAGATCGCCCTGGAGCTGTTCCAGCCGTTCATCATCCGCCGGCTCAAGGAGCTGGGCCACGCCGACACGATCAAGTCGGCCAAGAAGATGCTGGAGCGGCGCAGTGAGGAGGTGTGGGACATCCTGGAAGAGGTGATCCGCAACCACCCGGTCCTCCTCAACCGCGCCCCGACCCTCCACCGCATGGGCATCCAGGCGTTCGAGCCGGTCCTGGTGGAAGGGAACGCCATCCGGATCCACCCGCTGGTCTGCAAGGGCTTCAACGCCGACTTCGACGGCGACCAGATGGCCGTCCACCTGCCGCTCTCGATCGAGGCGCAGGTCGAGGCCATGACGCTGATGATGGCGACCAACAACATCTTCAGCCCGGCCAACGGCAACCCGATCATCAGCCCGACCCAGGACATCGTCATGGGGTCGTACTACCTCACGGCCCAGCGGGCCGGCGAGCCGGGCGACGGCATGACGTTCTCGTCCCCCAACGAGGTCTTCCTGGCCCACAGCCAGGGGAAGATCGGCCTGCACGCGCCGATCAAGCTCCGGCTGCCGGCCAACCGCCGGCTCAAGGGGGAGGGCGAGAAGGAGTACAAGCCGGGCATGGTCGTCGTCACGACCGCCGGCCGCGTCGTGTTCAACGACATCCTCCACCCGAAGATGCCGTACTACAACTTCGCGCTGGGGCAGAAGCAGCTCCAGGGGATCATCGCCGACTGCTACCAGATCCTCGGCCGGCGCGAGACCATCGCGCTGCTCGACCGGATGAAGGACGTCGGCTTCCGCGAGTCCACACGCTCGGGCCTCTCGTTCGCCACCGACGACCTCCGCACGCCGGCGACCAAGGACGGGATCATCGCCGAGGCCGAGAAGGAGGTCCAGCGCAACAACAAGCTGTACCATCGCGGCATCATCACGGACCAGGAGCGGTACAACAAGGTCCTGGACGCCTGGACCCACGCCCGCGAGCGGATCACCTCCGAGATGATGGAGGCCCTCAAGAACGACACCCGCGAGGGGGAGGGCCAGAAGAACTACCACAACCCGATCTTCCTGATGGCCGAGTCCGGCGCCCGCGGCGGCGTCGAGCAGATCCGCCAGCTGGCCGGCATGCGCGGCCTGATGGCCAAGCCGTCGGGCAAGATCATCGAGACGCCGATCAAGGCCAACTTCCGCGAGGGCCTGAGCGTGCTGGAGTACTTCTCCTCCACGCACGGCGCCCGCAAGGGCCTGGCCGACACGGCCCTCAAGACGGCCGACTCGGGCTACCTCACGCGCAAGCTCGCCGACGTCGCCCAGAACGTCGTCATCACCATCGAGGACTGCGGGACCTCGCAGGGGATCACCAAGGGCGTCATCTACAAGGGCGAGAAGGTCGAGGTCAGCCTCGCCCAGTCGATCCGCGGCCGGGTCAGCCGGGTCAACATCGTGGACCCGATCACCGACGAGGTGATCGTCCGCGAGAACGAGATGATCACGCTGAAGGCGGCCCTCAAGCTCGAAGACATGCAGATCGAGAAGATCCAGGTCCGCAGCCCGATGACGTGCGAGGCGTCGCTCGGCGTCTGCCGCCGCTGCTACGGCATGGACCTGGCCACCGGCCAGATGGTCGAAGGCGGCATGGCCGTCGGCATCATCGCCGCCCAGTCGATCGGCGAGCCGGGCACCCAGCTCACGATGCGGACGTTCCACATCGGCGGCGTGGCCACCCGCGCCGTCGAGGAGAAGGACGTCAAGTCGAAGCGCGAGGGCAAGGTCAAGTTCGTCGGCCTGAACATCGTCGTCAACGACGAAGGGAAGCCGATCGCCCTGTCCCGCAACGGCGAGATCCAGATCCTCGACCCGAAGGGCCGGGAGCTGGAGAAGTACGACGTGCCCGACGGCGCCATCATGACCGTCGAGGACGGCCAGCAGATCACCCGCGGCCAGATGCTGTGCGAATGGGACCCGCACAACATCCCGATCCTCTCCGAGGTCGGCGGCGTGATCCGCTTCGACGACATCGTCGAGGGCGAGACCATGAAGGTCGAGGCCGACCCGTCCGGCCACGTCCGCCGCACGATCATCGAGCACAAGGGCGACCTGCACCCGCAGGTGGTCATCGTCGACGCCGAGGGGAAGACGCTCGATTACAAGTACATCCCCGAGCGCGCCACCATCGAGGTCGAGGACGGCCAGCAGATCAGCGCCGGCACCCTGCTCGCCAAGACCCCCCGCGAGGTGGGCGGCACCCAGGATATCACCGGCGGCCTCCCCCGCGTCACCGAGCTGTTCGAGGCCCGGCGGCCCAAGGAGCCCGCGGTCATCGCCGAGATCGACGGCCGCGTCGAGCTGCTGGAGGAGAAGCGCCGCGGCAAGCGGACCATCGTCGTCCGCAACGAGAGCGGCATCGAGCGCGAGCACCAGGTCCCCCACGGCAAGTTCCTCCGCGTCCACGGCTCCGACCGCGTCCGCGCCGGCGACCCGCTCGTCGAGGGCCCGCTCGTCCCGCACGACATCCTCCGCATCTCCGGCGAGGAGGTCGTCCAGCGCTACCTCCTCCGCGAGATCCAGAACGTCTACCGCTCCCAGCGCGTCGAGATCGACGACAAGCACCTGGAGATCATCATCGCCCAGATGCTCCGCAAGGTCCGCGTCGACAGCCTCGGCGACACCGGCCTGCTCCCCGGCTCGGTCATCGACAAGTTCGAGTTCCGCCGGGTCAACAACGAGCTGATGGGCTGCGTGAAGATCAAGGACCCCGGCGAGACCGACTTCCGCGTCGGCGACATCGTCCCCCGCGACCACTTCGAGCAGGAGAACCTGCGCGTCGAGGCCGCCGGCGGCAAGAAGGCCGAGTGGCTCCGGACCAAGCCCGCCGCCGCGAGCACCCAGCTCCTGGGCATCACCAAGGCGGCCGTCCAGTCCGAGAGCTTCATCTCCGCCGCGAGCTTCCAAGAGACGACCAAGGTCCTCACCGAGGCCGCCCTGGCCGGCAAGAGCGACTACCTCGTCGGCCTGAAGGAGAACGTCATCCTCGGCCACCTCGTCCCGGCCGGCACGGGCTTCAAGGCCCACCTGGACGCCGAGGTCCGCATCCACCCCGACGCCCTCGAAGCCCTGGCCGAGAAGGGCTCCCCCTTCGCCCGCTACCGCGACGAGCCCGCCCCGGCCGCCGCCGCCCCCGCCGGCAAGGAGTGA
PROTEIN sequence
Length: 1425
VSMGESAYDRINDYGAVKIGLASPYDIRSWSFGEVKKPETINYRTYRPEKDGLFCERIFGPEKDWECACGKYRGMKYKGMICDRCGVKVTHSRVRRKRMGHIELAAPVVHIWFFKAMPSRLGTLLDMKTSSLERIIYFQDYVVVEAGDTPLKETQLLTEEDFRKAREAYGDGFQADMGAEAVRKLLMRLDLVSLSKTLRENLQETTSKQKIKDLTKRLKVVEALRDSDNRPEWMVLEAIPVIPPDLRPLVLLDSGNFATSDLNDLYRRIINRNNRLKKLVDLNAPEVIIRNEKRMLQQAVDALFDNNRCKRPVLGSSNRPLKSLTDMIKGKQGRFRENLLGKRVDYSARSVIVVGPDLKLHQCGLPKKIALELFQPFIIRRLKELGHADTIKSAKKMLERRSEEVWDILEEVIRNHPVLLNRAPTLHRMGIQAFEPVLVEGNAIRIHPLVCKGFNADFDGDQMAVHLPLSIEAQVEAMTLMMATNNIFSPANGNPIISPTQDIVMGSYYLTAQRAGEPGDGMTFSSPNEVFLAHSQGKIGLHAPIKLRLPANRRLKGEGEKEYKPGMVVVTTAGRVVFNDILHPKMPYYNFALGQKQLQGIIADCYQILGRRETIALLDRMKDVGFRESTRSGLSFATDDLRTPATKDGIIAEAEKEVQRNNKLYHRGIITDQERYNKVLDAWTHARERITSEMMEALKNDTREGEGQKNYHNPIFLMAESGARGGVEQIRQLAGMRGLMAKPSGKIIETPIKANFREGLSVLEYFSSTHGARKGLADTALKTADSGYLTRKLADVAQNVVITIEDCGTSQGITKGVIYKGEKVEVSLAQSIRGRVSRVNIVDPITDEVIVRENEMITLKAALKLEDMQIEKIQVRSPMTCEASLGVCRRCYGMDLATGQMVEGGMAVGIIAAQSIGEPGTQLTMRTFHIGGVATRAVEEKDVKSKREGKVKFVGLNIVVNDEGKPIALSRNGEIQILDPKGRELEKYDVPDGAIMTVEDGQQITRGQMLCEWDPHNIPILSEVGGVIRFDDIVEGETMKVEADPSGHVRRTIIEHKGDLHPQVVIVDAEGKTLDYKYIPERATIEVEDGQQISAGTLLAKTPREVGGTQDITGGLPRVTELFEARRPKEPAVIAEIDGRVELLEEKRRGKRTIVVRNESGIEREHQVPHGKFLRVHGSDRVRAGDPLVEGPLVPHDILRISGEEVVQRYLLREIQNVYRSQRVEIDDKHLEIIIAQMLRKVRVDSLGDTGLLPGSVIDKFEFRRVNNELMGCVKIKDPGETDFRVGDIVPRDHFEQENLRVEAAGGKKAEWLRTKPAAASTQLLGITKAAVQSESFISAASFQETTKVLTEAALAGKSDYLVGLKENVILGHLVPAGTGFKAHLDAEVRIHPDALEALAEKGSPFARYRDEPAPAAAAPAGKE*