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scnpilot_p_inoc_scaffold_893_curated_35

Organism: scnpilot_dereplicated_Planctomycetales_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 14 / 38 MC: 3
Location: 37917..38498

Top 3 Functional Annotations

Value Algorithm Source
probable RNA polymerase sigma factor nccH n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4C53 similarity UNIREF
DB: UNIREF100
  • Identity: 51.8
  • Coverage: 195.0
  • Bit_score: 181
  • Evalue 1.00e-42
RNA polymerase sigma factor Y {ECO:0000313|EMBL:EMI42727.1}; TaxID=595460 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sp. SWK7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.9
  • Coverage: 196.0
  • Bit_score: 169
  • Evalue 4.30e-39
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 47.9
  • Coverage: 190.0
  • Bit_score: 162
  • Evalue 1.20e-37

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Taxonomy

Rhodopirellula sp. SWK7 → Rhodopirellula → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 582
GTGGAACCGACGTCCCTCAGCTTGCTGGACCGGCTCAGGTCGGCGCGTCCGGACGCGTCCGACTGGGACCGCCTGCACGGCCTGTACCTGCCGCTGATCCGCGGCTGGCTGGGGCGCGTCCCGGGCCTGGGCGCCGAGGCCGACGACCTGGCGCAGGACGTCTTCGCGGTCCTCATCCGCGAACTCCCCCGCTTCGACCGCCGCCGCGAGGGCTCGTTCCGCGCCTGGCTGCGCCAGGTGGCCGTGAACCGCGTGCGGTCCCACCGCCGGCGCGGCCGGCGCATCCCCGTCGCCGGGCTCGACCCGGCCGAGGGATTCCTGGACCGCCTCGCCGACCCCGCCGGCGACCTGGCCCGCGAGTGGGACCGCGAGCACGACCGGTTCGTCTTCGACCGCCTCCTGGAGGTCGTCCGGCCGGACTTCGCGCCCGCGACGTGGGAGGCGTTCCGCCGGTTCGCCCTGGACGGCCTCCCCGCCGCCGAGGTCGCCGCCGGGCTGGGCCTGTCCGAGAACGCCGTGATCCGGGCCAAGTCGCGGATCCTCAAGAGGTTGCGGGCCGAGGCGGGGGATTTCCTGAGCTGA
PROTEIN sequence
Length: 194
VEPTSLSLLDRLRSARPDASDWDRLHGLYLPLIRGWLGRVPGLGAEADDLAQDVFAVLIRELPRFDRRREGSFRAWLRQVAVNRVRSHRRRGRRIPVAGLDPAEGFLDRLADPAGDLAREWDREHDRFVFDRLLEVVRPDFAPATWEAFRRFALDGLPAAEVAAGLGLSENAVIRAKSRILKRLRAEAGDFLS*