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scnpilot_p_inoc_scaffold_273_curated_76

Organism: scnpilot_dereplicated_Planctomycetales_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 14 / 38 MC: 3
Location: comp(88976..89518)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2QWX4_PIRSD similarity UNIREF
DB: UNIREF100
  • Identity: 47.9
  • Coverage: 167.0
  • Bit_score: 152
  • Evalue 3.60e-34
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 47.9
  • Coverage: 167.0
  • Bit_score: 152
  • Evalue 1.10e-34
Tax=RBG_13_Planctomycetes_63_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 57.0
  • Coverage: 151.0
  • Bit_score: 157
  • Evalue 1.60e-35

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Taxonomy

RBG_13_Planctomycetes_63_9_curated → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 543
ATGGACTCGGACGAGCCCGACTGGGGCGGGCTGCTGGCCCGCCACGACGGCTGGCTGCGGCGCGTGGTCTCGGCCCGCCTGCGCGAGCCGCAGGGGGTCGACGAGGTCATGCAGGAGGTCGCGCTGGCGGTCGTCGCCGGGCGGTCTCCCCGGATCGATCCCGCGCGGCTGGTCGGCTGGCTGTACCGCGTGGCGGTGCGCCAGACGTTGCTGTACCGGCGGAAGGCGGGGCGGGGCCGGGCGTTGATCGGCCGCTGCGCCGTCGCCCGCCCCGCGACCGACGAGGCCCCGGGGCCGTCGCCGCTGGCCTGGCTCCTGCACGACGAGCGCCGGGAGCTGGTCCGCCGGGCGCTCGACCGGCTTCCCCCTCGCGATGCGGACCTGCTGACGCTGAAGCACGGCGAGGGCTGGACCGCCCGCGAGCTGGCCAAGCGGCTGGGCGTGGGCGTGCCGGGGATCGAGGCCCGGCTCTCCCGGGCGCGGAAACGGCTGCGGGCCGAGCTGGCCGACCTGGCGGGCGACTTCGAGGAGCACGACCGATGA
PROTEIN sequence
Length: 181
MDSDEPDWGGLLARHDGWLRRVVSARLREPQGVDEVMQEVALAVVAGRSPRIDPARLVGWLYRVAVRQTLLYRRKAGRGRALIGRCAVARPATDEAPGPSPLAWLLHDERRELVRRALDRLPPRDADLLTLKHGEGWTARELAKRLGVGVPGIEARLSRARKRLRAELADLAGDFEEHDR*