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scnpilot_p_inoc_scaffold_420_curated_25

Organism: scnpilot_dereplicated_Planctomycetales_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 14 / 38 MC: 3
Location: comp(29574..30188)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase specialized sigma subunit, sigma24 n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DL45_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 51.8
  • Coverage: 199.0
  • Bit_score: 185
  • Evalue 5.70e-44
DNA-directed RNA polymerase subunit sigma24 similarity KEGG
DB: KEGG
  • Identity: 51.8
  • Coverage: 199.0
  • Bit_score: 185
  • Evalue 1.80e-44
Tax=RBG_16_Planctomycetes_64_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 55.8
  • Coverage: 199.0
  • Bit_score: 208
  • Evalue 1.20e-50

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Taxonomy

RBG_16_Planctomycetes_64_10_curated → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 615
ATGTCCACGCCCGAATCCGAGGCCGACGGCTTCCGCGCGCTGATCGGCCGCGTCCGCAACGGCGACGAGGGAGCGGCGGCCGAGCTGGTGCGCCGCTACGAGCCGGCCGTCCGCCGCGCCGCGCGGGTCCGGTTGGTCGACACCCGGCTGAACCGCATGCTCGATTCGATGGACGTCTGCCAGTCCGTCATGGCGAGCTTCTTCGTCCGTGCGGCGATGGGCCAGTACGAGCTGGACGCGCCCGATCAGCTCCTGAAACTGCTGGCGACCATGACCCGCAACAAGCTGGCGAACGCCGTGAAGGCCCAGGGGGCCAAGCGTCGCGACTTCCGCCGCACCCGGGCCGGCGGCGGCGAGGGGGACGAGTCCGAGGGCGGGGCCTTCGCCGAGGTCGCCGGCCCGCTGCCGACGCCCAGCCGCGAGGTCGCCGCCCGCGAGATGCTCGACGAGGCCCGCCGCCGCCTCTCGCCCGACGAGCGCCGGATCCTCGACGGCCGCGAGGCCGGCCGCGACTGGGCCGAGATCGCCGCCGACCTGGGCGGCAGCCCCGAGGCCCTGCGCAAACGCCTCGCGCGCGCCGTCGACCGCGTGGCGGACGAGCTGGGCCTCGAATGA
PROTEIN sequence
Length: 205
MSTPESEADGFRALIGRVRNGDEGAAAELVRRYEPAVRRAARVRLVDTRLNRMLDSMDVCQSVMASFFVRAAMGQYELDAPDQLLKLLATMTRNKLANAVKAQGAKRRDFRRTRAGGGEGDESEGGAFAEVAGPLPTPSREVAAREMLDEARRRLSPDERRILDGREAGRDWAEIAADLGGSPEALRKRLARAVDRVADELGLE*