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scnpilot_p_inoc_scaffold_420_curated_49

Organism: scnpilot_dereplicated_Planctomycetales_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 14 / 38 MC: 3
Location: 66869..67537

Top 3 Functional Annotations

Value Algorithm Source
sigma-70 family RNA polymerase sigma factor n=1 Tax=Schlesneria paludicola RepID=UPI00029B00A0 similarity UNIREF
DB: UNIREF100
  • Identity: 42.2
  • Coverage: 192.0
  • Bit_score: 157
  • Evalue 1.80e-35
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 34.0
  • Coverage: 197.0
  • Bit_score: 103
  • Evalue 7.50e-20
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGA27495.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.0
  • Coverage: 197.0
  • Bit_score: 103
  • Evalue 3.30e-19

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 669
ATGGCGGACGAGGACGTCGCACCATCTCCCCACGACAGCCGGACCCAGATCATGCCGATCACCGACACGCCGACCAGGGTCTCGATCATCGAGGGCGTCCGGGGCCGCGGCCCCGACCGCTGGGTGGAGTTCTACGCGATCTACAAGCCCATGCTCGTGGGATACTTCCGCAAGCAGGGCCTGTCCGACGGCGACGCCCAGGACATGGTCCAGGAGGTCTTCCTCAAGCTCTGCAAGCGGATCCACACCTACGACCGCGAGCGCACCCGGTTCCGCACCTGGCTGTTCACCGTGGCGCGGAACACGCTGATCGACCGCGCCCGCCGCGACCAGACCCAGCGCCACGCCGTCGACGGCTGGGTCAAGCGGGTGCTGGAGGAGGCCACCGGCGACGAGGAACGGCAGCGGCGGGAGTTCGAACGCTCCCACCACACCCGGATCCTCCAGTACGCCTTCGAGAAGGTGCGCCGGCGCTCCTCCGAGCGCGTCTGGAACTGCTTCGAGATGTCCGTGATCCAGGGAAAGCCGGGGGCCGAGGTCGCCGCCGCGCTGGGGGTCTCGGCGAACGTGGTGTACGTGAACTCGTGGCGGGTCCTCCAGAACGTGAAGGACCTCTGCCGGCGCTACGACGAGGACCTCAAGCATGACCCGGACGACCGCCTGCCCTGA
PROTEIN sequence
Length: 223
MADEDVAPSPHDSRTQIMPITDTPTRVSIIEGVRGRGPDRWVEFYAIYKPMLVGYFRKQGLSDGDAQDMVQEVFLKLCKRIHTYDRERTRFRTWLFTVARNTLIDRARRDQTQRHAVDGWVKRVLEEATGDEERQRREFERSHHTRILQYAFEKVRRRSSERVWNCFEMSVIQGKPGAEVAAALGVSANVVYVNSWRVLQNVKDLCRRYDEDLKHDPDDRLP*